Mulvaney T - Search Results

1

RIBFIND2: Identifying rigid bodies in protein and nucleic acid structures.

Malhotra S, Mulvaney T, Cragnolini T, Sidhu H, Joseph AP, Beton JG, Topf M. Malhotra S, et al. Among authors: mulvaney t. Nucleic Acids Res. 2023 Oct 13;51(18):9567-9575. doi: 10.1093/nar/gkad721. Nucleic Acids Res. 2023. PMID: 37670532 Free PMC article.

2

Assessment of three-dimensional RNA structure prediction in CASP15.

Das R, Kretsch RC, Simpkin AJ, Mulvaney T, Pham P, Rangan R, Bu F, Keegan RM, Topf M, Rigden DJ, Miao Z, Westhof E. Das R, et al. Among authors: mulvaney t. bioRxiv [Preprint]. 2023 Oct 3:2023.04.25.538330. doi: 10.1101/2023.04.25.538330. bioRxiv. 2023. Update in: Proteins. 2023 Dec;91(12):1747-1770. doi: 10.1002/prot.26602 PMID: 37162955 Free PMC article. Updated. Preprint.

3

CASP15 cryoEM protein and RNA targets: refinement and analysis using experimental maps.

Mulvaney T, Kretsch RC, Elliott L, Beton J, Kryshtafovych A, Rigden DJ, Das R, Topf M. Mulvaney T, et al. bioRxiv [Preprint]. 2023 Aug 8:2023.08.07.552287. doi: 10.1101/2023.08.07.552287. bioRxiv. 2023. Update in: Proteins. 2023 Dec;91(12):1935-1951. doi: 10.1002/prot.26644 PMID: 37609268 Free PMC article. Updated. Preprint.

4

PICKLUSTER: a protein-interface clustering and analysis plug-in for UCSF ChimeraX.

Genz LR, Mulvaney T, Nair S, Topf M. Genz LR, et al. Among authors: mulvaney t. Bioinformatics. 2023 Nov 1;39(11):btad629. doi: 10.1093/bioinformatics/btad629. Bioinformatics. 2023. PMID: 37846034 Free PMC article.

5

Assessment of three-dimensional RNA structure prediction in CASP15.

Das R, Kretsch RC, Simpkin AJ, Mulvaney T, Pham P, Rangan R, Bu F, Keegan RM, Topf M, Rigden DJ, Miao Z, Westhof E. Das R, et al. Among authors: mulvaney t. Proteins. 2023 Dec;91(12):1747-1770. doi: 10.1002/prot.26602. Epub 2023 Oct 24. Proteins. 2023. PMID: 37876231 Free PMC article.

6

CASP15 cryo-EM protein and RNA targets: Refinement and analysis using experimental maps.

Mulvaney T, Kretsch RC, Elliott L, Beton JG, Kryshtafovych A, Rigden DJ, Das R, Topf M. Mulvaney T, et al. Proteins. 2023 Dec;91(12):1935-1951. doi: 10.1002/prot.26644. Proteins. 2023. PMID: 37994556 Free PMC article.

7

ChemEM: Flexible Docking of Small Molecules in Cryo-EM Structures.

Sweeney A, Mulvaney T, Maiorca M, Topf M. Sweeney A, et al. Among authors: mulvaney t. J Med Chem. 2024 Jan 11;67(1):199-212. doi: 10.1021/acs.jmedchem.3c01134. Epub 2023 Dec 29. J Med Chem. 2024. PMID: 38157562 Free PMC article.

8

Cryo-EM structure and B-factor refinement with ensemble representation.

Beton JG, Mulvaney T, Cragnolini T, Topf M. Beton JG, et al. Among authors: mulvaney t. Nat Commun. 2024 Jan 10;15(1):444. doi: 10.1038/s41467-023-44593-1. Nat Commun. 2024. PMID: 38200043 Free PMC article.

9

Order and correlation contributions to the entropy of hydrophobic solvation.

Liu M, Besford QA, Mulvaney T, Gray-Weale A. Liu M, et al. Among authors: mulvaney t. J Chem Phys. 2015 Mar 21;142(11):114117. doi: 10.1063/1.4908532. J Chem Phys. 2015. PMID: 25796241

10

Management of spasticity in cerebral palsy with botulinum-A toxin: report of a preliminary, randomized, double-blind trial.

Koman LA, Mooney JF 3rd, Smith BP, Goodman A, Mulvaney T. Koman LA, et al. Among authors: mulvaney t. J Pediatr Orthop. 1994 May-Jun;14(3):299-303. doi: 10.1097/01241398-199405000-00005. J Pediatr Orthop. 1994. PMID: 8006158 Clinical Trial.

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