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Proteomic and phosphoproteomic comparison of human ES and iPS cells.
Phanstiel DH, Brumbaugh J, Wenger CD, Tian S, Probasco MD, Bailey DJ, Swaney DL, Tervo MA, Bolin JM, Ruotti V, Stewart R, Thomson JA, Coon JJ. Phanstiel DH, et al. Nat Methods. 2011 Sep 11;8(10):821-7. doi: 10.1038/nmeth.1699. Nat Methods. 2011. PMID: 21983960 Free PMC article.
Genome-wide map of regulatory interactions in the human genome.
Heidari N, Phanstiel DH, He C, Grubert F, Jahanbani F, Kasowski M, Zhang MQ, Snyder MP. Heidari N, et al. Among authors: phanstiel dh. Genome Res. 2014 Dec;24(12):1905-17. doi: 10.1101/gr.176586.114. Epub 2014 Sep 16. Genome Res. 2014. PMID: 25228660 Free PMC article.
CoralP: Flexible visualization of the human phosphatome.
Min A, Deoudes E, Bond ML, Davis ES, Phanstiel DH. Min A, et al. Among authors: phanstiel dh. J Open Source Softw. 2019;4(44):1837. doi: 10.21105/joss.01837. Epub 2019 Dec 3. J Open Source Softw. 2019. PMID: 31903446 Free PMC article.
Bedtoolsr: An R package for genomic data analysis and manipulation.
Patwardhan MN, Wenger CD, Davis ES, Phanstiel DH. Patwardhan MN, et al. Among authors: phanstiel dh. J Open Source Softw. 2019;4(44):1742. doi: 10.21105/joss.01742. Epub 2019 Dec 6. J Open Source Softw. 2019. PMID: 31903447 Free PMC article.
Phase separation drives aberrant chromatin looping and cancer development.
Ahn JH, Davis ES, Daugird TA, Zhao S, Quiroga IY, Uryu H, Li J, Storey AJ, Tsai YH, Keeley DP, Mackintosh SG, Edmondson RD, Byrum SD, Cai L, Tackett AJ, Zheng D, Legant WR, Phanstiel DH, Wang GG. Ahn JH, et al. Among authors: phanstiel dh. Nature. 2021 Jul;595(7868):591-595. doi: 10.1038/s41586-021-03662-5. Epub 2021 Jun 23. Nature. 2021. PMID: 34163069 Free PMC article.
47 results