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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures.
Thomas SC, Tamadonfar KO, Seymour CO, Lai D, Dodsworth JA, Murugapiran SK, Eloe-Fadrosh EA, Dijkstra P, Hedlund BP. Thomas SC, et al. Among authors: lai d. Front Microbiol. 2019 Jul 5;10:1427. doi: 10.3389/fmicb.2019.01427. eCollection 2019. Front Microbiol. 2019. PMID: 31333598 Free PMC article.
Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan.
Thomas SC, Payne D, Tamadonfar KO, Seymour CO, Jiao JY, Murugapiran SK, Lai D, Lau R, Bowen BP, Silva LP, Louie KB, Huntemann M, Clum A, Spunde A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Chen IM, Stamatis D, Reddy TBK, O'Malley R, Daum C, Shapiro N, Ivanova N, Kyrpides NC, Woyke T, Eloe-Fadrosh E, Hamilton TL, Dijkstra P, Dodsworth JA, Northen TR, Li WJ, Hedlund BP. Thomas SC, et al. Among authors: lai d. Front Microbiol. 2021 May 3;12:632731. doi: 10.3389/fmicb.2021.632731. eCollection 2021. Front Microbiol. 2021. PMID: 34017316 Free PMC article.
An Aniline-Substituted Bile Salt Analog Protects both Mice and Hamsters from Multiple Clostridioides difficile Strains.
Phan JR, Do DM, Truong MC, Ngo C, Phan JH, Sharma SK, Schilke A, Mefferd CC, Villarama JV, Lai D, Consul A, Hedlund BP, Firestine SM, Abel-Santos E. Phan JR, et al. Among authors: lai d. Antimicrob Agents Chemother. 2022 Jan 18;66(1):e0143521. doi: 10.1128/AAC.01435-21. Epub 2021 Nov 15. Antimicrob Agents Chemother. 2022. PMID: 34780262 Free PMC article.
An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea.
Buessecker S, Palmer M, Lai D, Dimapilis J, Mayali X, Mosier D, Jiao JY, Colman DR, Keller LM, St John E, Miranda M, Gonzalez C, Gonzalez L, Sam C, Villa C, Zhuo M, Bodman N, Robles F, Boyd ES, Cox AD, St Clair B, Hua ZS, Li WJ, Reysenbach AL, Stott MB, Weber PK, Pett-Ridge J, Dekas AE, Hedlund BP, Dodsworth JA. Buessecker S, et al. Among authors: lai d. Nat Commun. 2022 Jun 30;13(1):3773. doi: 10.1038/s41467-022-31452-8. Nat Commun. 2022. PMID: 35773279 Free PMC article.
Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota.
Seymour CO, Palmer M, Becraft ED, Stepanauskas R, Friel AD, Schulz F, Woyke T, Eloe-Fadrosh E, Lai D, Jiao JY, Hua ZS, Liu L, Lian ZH, Li WJ, Chuvochina M, Finley BK, Koch BJ, Schwartz E, Dijkstra P, Moser DP, Hungate BA, Hedlund BP. Seymour CO, et al. Among authors: lai d. Nat Microbiol. 2023 Apr;8(4):727-744. doi: 10.1038/s41564-022-01319-1. Epub 2023 Mar 16. Nat Microbiol. 2023. PMID: 36928026 Free PMC article.
Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past.
Palmer M, Covington JK, Zhou EM, Thomas SC, Habib N, Seymour CO, Lai D, Johnston J, Hashimi A, Jiao JY, Muok AR, Liu L, Xian WD, Zhi XY, Li MM, Silva LP, Bowen BP, Louie K, Briegel A, Pett-Ridge J, Weber PK, Tocheva EI, Woyke T, Northen TR, Mayali X, Li WJ, Hedlund BP. Palmer M, et al. Among authors: lai d. ISME J. 2023 Jul;17(7):952-966. doi: 10.1038/s41396-023-01405-0. Epub 2023 Apr 11. ISME J. 2023. PMID: 37041326 Free PMC article.
Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota.
Nou NO, Covington JK, Lai D, Mayali X, Seymour CO, Johnston J, Jiao JY, Buessecker S, Mosier D, Muok AR, Torosian N, Cook AM, Briegel A, Woyke T, Eloe-Fadrosh E, Shapiro N, Bryan SG, Sleezer S, Dimapilis J, Gonzalez C, Gonzalez L, Noriega M, Hess M, Carlson RP, Liu L, Li MM, Lian ZH, Zhu S, Liu F, Sun X, Gao B, Mewalal R, Harmon-Smith M, Blaby IK, Cheng JF, Weber PK, Grigorean G, Li WJ, Dekas AE, Pett-Ridge J, Dodsworth JA, Palmer M, Hedlund BP. Nou NO, et al. Among authors: lai d. Nat Commun. 2024 Nov 4;15(1):9534. doi: 10.1038/s41467-024-53784-3. Nat Commun. 2024. PMID: 39496591 Free PMC article.
1,834 results