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IMA genome-F18 : The re-identification of Penicillium genomes available in NCBI and draft genomes for Penicillium species from dry cured meat, Penicillium biforme, P. brevicompactum, P. solitum, and P. cvjetkovicii, Pewenomyces kutranfy, Pew. lalenivora, Pew. tapulicola, Pew. kalosus, Teratosphaeria carnegiei, and Trichoderma atroviride SC1.
Visagie CM, Magistà D, Ferrara M, Balocchi F, Duong TA, Eichmeier A, Gramaje D, Aylward J, Baker SE, Barnes I, Calhoun S, De Angelis M, Frisvad JC, Hakalova E, Hayes RD, Houbraken J, Grigoriev IV, LaButti K, Leal C, Lipzen A, Ng V, Pangilinan J, Pecenka J, Perrone G, Piso A, Savage E, Spetik M, Wingfield MJ, Zhang Y, Wingfield BD. Visagie CM, et al. Among authors: calhoun s. IMA Fungus. 2023 Oct 6;14(1):21. doi: 10.1186/s43008-023-00121-w. IMA Fungus. 2023. PMID: 37803441 Free PMC article. No abstract available.
A scaffolded and annotated reference genome of giant kelp (Macrocystis pyrifera).
Diesel J, Molano G, Montecinos GJ, DeWeese K, Calhoun S, Kuo A, Lipzen A, Salamov A, Grigoriev IV, Reed DC, Miller RJ, Nuzhdin SV, Alberto F. Diesel J, et al. Among authors: calhoun s. BMC Genomics. 2023 Sep 13;24(1):543. doi: 10.1186/s12864-023-09658-x. BMC Genomics. 2023. PMID: 37704968 Free PMC article.
Genome-scale phylogeny and comparative genomics of the fungal order Sordariales.
Hensen N, Bonometti L, Westerberg I, Brännström IO, Guillou S, Cros-Aarteil S, Calhoun S, Haridas S, Kuo A, Mondo S, Pangilinan J, Riley R, LaButti K, Andreopoulos B, Lipzen A, Chen C, Yan M, Daum C, Ng V, Clum A, Steindorff A, Ohm RA, Martin F, Silar P, Natvig DO, Lalanne C, Gautier V, Ament-Velásquez SL, Kruys Å, Hutchinson MI, Powell AJ, Barry K, Miller AN, Grigoriev IV, Debuchy R, Gladieux P, Hiltunen Thorén M, Johannesson H. Hensen N, et al. Among authors: calhoun s. Mol Phylogenet Evol. 2023 Dec;189:107938. doi: 10.1016/j.ympev.2023.107938. Epub 2023 Oct 10. Mol Phylogenet Evol. 2023. PMID: 37820761 Free article.
Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota.
Oliver T, Varghese N, Roux S, Schulz F, Huntemann M, Clum A, Foster B, Foster B, Riley R, LaButti K, Egan R, Hajek P, Mukherjee S, Ovchinnikova G, Reddy TBK, Calhoun S, Hayes RD, Rohwer RR, Zhou Z, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Mouncey NJ, Del Rio TG, Grigoriev IV, Hofmeyr S, Oliker L, Yelick K, Anantharaman K, McMahon KD, Woyke T, Eloe-Fadrosh EA. Oliver T, et al. Among authors: calhoun s. Sci Data. 2024 Sep 4;11(1):966. doi: 10.1038/s41597-024-03826-8. Sci Data. 2024. PMID: 39231974 Free PMC article.
Genome assembly and annotation of microalga Nannochloropsis oceanica C018.
Estrada-Graf A, Koneru H, Arnold J, Calhoun S, Grigoriev IV, Johnson ZI. Estrada-Graf A, et al. Among authors: calhoun s. Microbiol Resour Announc. 2024 Dec 27:e0088324. doi: 10.1128/mra.00883-24. Online ahead of print. Microbiol Resour Announc. 2024. PMID: 39727385 Free article.
Thrombectomy for Stroke With Large Infarct on Noncontrast CT: The TESLA Randomized Clinical Trial.
Writing Committee for the TESLA Investigators; Yoo AJ, Zaidat OO, Sheth SA, Rai AT, Ortega-Gutierrez S, Given CA 2nd, Zaidi SF, Grandhi R, Cuellar H, Mokin M, Katz JM, Alshekhlee A, Taqi MA, Ansari SA, Siddiqui AH, Barazangi N, English JD, Maud A, Kirmani J, Gupta R, Yavagal DR, Tarpley J, Pandya DJ, Cress MC, Dharmadhikari S, Asif KS, Kass-Hout T, Puri AS, Janjua N, Majjhoo AQ, Badruddin A, Edgell RC, Khatri R, Morgan L, Razak A, Zha A, Khandelwal P, Mueller-Kronast N, Rivet DJ, Wolfe T, Snelling B, Sultan-Qurraie A, Lin SP, Khangura R, Spiotta AM, Bhuva P, Salazar-Marioni S, Lin E, Tarabishy AR, Samaniego EA, Kolikonda MK, Jumaa MA, Reddy VK, Sharma P, Berkhemer OA, van Doormaal PJ, van Es ACGM, van Zwam WH, Emmer BJ, Beenen LF, Majoie CBLM, Buderer N, Detry MA, Bosse A, Graves TL, Saunders C, Elijovich L, Jadhav A, Patterson M, Slight H, Below K, Al Kasab S; TESLA Investigators. Writing Committee for the TESLA Investigators, et al. JAMA. 2024 Sep 23;332(16):1355-66. doi: 10.1001/jama.2024.13933. Online ahead of print. JAMA. 2024. PMID: 39374319
245 results