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Advancing microbiome research with machine learning: key findings from the ML4Microbiome COST action.
D'Elia D, Truu J, Lahti L, Berland M, Papoutsoglou G, Ceci M, Zomer A, Lopes MB, Ibrahimi E, Gruca A, Nechyporenko A, Frohme M, Klammsteiner T, Pau ECS, Marcos-Zambrano LJ, Hron K, Pio G, Simeon A, Suharoschi R, Moreno-Indias I, Temko A, Nedyalkova M, Apostol ES, Truică CO, Shigdel R, Telalović JH, Bongcam-Rudloff E, Przymus P, Jordamović NB, Falquet L, Tarazona S, Sampri A, Isola G, Pérez-Serrano D, Trajkovik V, Klucar L, Loncar-Turukalo T, Havulinna AS, Jansen C, Bertelsen RJ, Claesson MJ. D'Elia D, et al. Among authors: temko a. Front Microbiol. 2023 Sep 25;14:1257002. doi: 10.3389/fmicb.2023.1257002. eCollection 2023. Front Microbiol. 2023. PMID: 37808321 Free PMC article.
Machine learning approaches in microbiome research: challenges and best practices.
Papoutsoglou G, Tarazona S, Lopes MB, Klammsteiner T, Ibrahimi E, Eckenberger J, Novielli P, Tonda A, Simeon A, Shigdel R, Béreux S, Vitali G, Tangaro S, Lahti L, Temko A, Claesson MJ, Berland M. Papoutsoglou G, et al. Among authors: temko a. Front Microbiol. 2023 Sep 22;14:1261889. doi: 10.3389/fmicb.2023.1261889. eCollection 2023. Front Microbiol. 2023. PMID: 37808286 Free PMC article. Review.
Temporal evolution of electrographic seizures in newborn infants with hypoxic-ischaemic encephalopathy requiring therapeutic hypothermia: a secondary analysis of the ANSeR studies.
Pavel AM, Rennie JM, de Vries LS, Mathieson SR, Livingstone V, Finder M, Foran A, Shah DK, Pressler RM, Weeke LC, Dempsey EM, Murray DM, Boylan GB; ANSeR Consortium. Pavel AM, et al. Lancet Child Adolesc Health. 2024 Mar;8(3):214-224. doi: 10.1016/S2352-4642(23)00296-1. Epub 2024 Jan 18. Lancet Child Adolesc Health. 2024. PMID: 38246187 Free PMC article. Clinical Trial.
A method for AI assisted human interpretation of neonatal EEG.
Gomez-Quintana S, O'Shea A, Factor A, Popovici E, Temko A. Gomez-Quintana S, et al. Among authors: temko a. Sci Rep. 2022 Jun 29;12(1):10932. doi: 10.1038/s41598-022-14894-4. Sci Rep. 2022. PMID: 35768501 Free PMC article.
Towards Deeper Neural Networks for Neonatal Seizure Detection.
Daly A, O'Shea A, Lightbody G, Temko A. Daly A, et al. Among authors: temko a. Annu Int Conf IEEE Eng Med Biol Soc. 2021 Nov;2021:920-923. doi: 10.1109/EMBC46164.2021.9629485. Annu Int Conf IEEE Eng Med Biol Soc. 2021. PMID: 34891440
Automatic segmentation for neonatal phonocardiogram.
Gomez-Quintana S, Shelevytsky I, Shelevytska V, Popovici E, Temko A. Gomez-Quintana S, et al. Among authors: temko a. Annu Int Conf IEEE Eng Med Biol Soc. 2021 Nov;2021:135-138. doi: 10.1109/EMBC46164.2021.9630574. Annu Int Conf IEEE Eng Med Biol Soc. 2021. PMID: 34891256
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