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14 examples of how LLMs can transform materials science and chemistry: a reflection on a large language model hackathon.
Jablonka KM, Ai Q, Al-Feghali A, Badhwar S, Bocarsly JD, Bran AM, Bringuier S, Brinson LC, Choudhary K, Circi D, Cox S, de Jong WA, Evans ML, Gastellu N, Genzling J, Gil MV, Gupta AK, Hong Z, Imran A, Kruschwitz S, Labarre A, Lála J, Liu T, Ma S, Majumdar S, Merz GW, Moitessier N, Moubarak E, Mouriño B, Pelkie B, Pieler M, Ramos MC, Ranković B, Rodriques SG, Sanders JN, Schwaller P, Schwarting M, Shi J, Smit B, Smith BE, Van Herck J, Völker C, Ward L, Warren S, Weiser B, Zhang S, Zhang X, Zia GA, Scourtas A, Schmidt KJ, Foster I, White AD, Blaiszik B. Jablonka KM, et al. Among authors: foster i. Digit Discov. 2023 Aug 8;2(5):1233-1250. doi: 10.1039/d3dd00113j. eCollection 2023 Oct 9. Digit Discov. 2023. PMID: 38013906 Free PMC article. Review.
Lynx web services for annotations and systems analysis of multi-gene disorders.
Sulakhe D, Taylor A, Balasubramanian S, Feng B, Xie B, Börnigen D, Dave UJ, Foster IT, Gilliam TC, Maltsev N. Sulakhe D, et al. Nucleic Acids Res. 2014 Jul;42(Web Server issue):W473-7. doi: 10.1093/nar/gku517. Epub 2014 Jun 19. Nucleic Acids Res. 2014. PMID: 24948611 Free PMC article.
'N-of-1-pathways' unveils personal deregulated mechanisms from a single pair of RNA-Seq samples: towards precision medicine.
Gardeux V, Achour I, Li J, Maienschein-Cline M, Li H, Pesce L, Parinandi G, Bahroos N, Winn R, Foster I, Garcia JG, Lussier YA. Gardeux V, et al. Among authors: foster i. J Am Med Inform Assoc. 2014 Nov-Dec;21(6):1015-25. doi: 10.1136/amiajnl-2013-002519. Epub 2014 Jun 12. J Am Med Inform Assoc. 2014. PMID: 25301808 Free PMC article.
caGrid 1.0: a Grid enterprise architecture for cancer research.
Oster S, Langella S, Hastings S, Ervin D, Madduri R, Kurc T, Siebenlist F, Covitz P, Shanbhag K, Foster I, Saltz J. Oster S, et al. Among authors: foster i. AMIA Annu Symp Proc. 2007 Oct 11;2007:573-7. AMIA Annu Symp Proc. 2007. PMID: 18693901 Free PMC article.
Prevalence of Inherited Mutations in Breast Cancer Predisposition Genes among Women in Uganda and Cameroon.
Adedokun B, Zheng Y, Ndom P, Gakwaya A, Makumbi T, Zhou AY, Yoshimatsu TF, Rodriguez A, Madduri RK, Foster IT, Sallam A, Olopade OI, Huo D. Adedokun B, et al. Among authors: foster it. Cancer Epidemiol Biomarkers Prev. 2020 Feb;29(2):359-367. doi: 10.1158/1055-9965.EPI-19-0506. Epub 2019 Dec 23. Cancer Epidemiol Biomarkers Prev. 2020. PMID: 31871109 Free PMC article.
The grid: computing without bounds.
Foster I. Foster I. Sci Am. 2003 Apr;288(4):78-85. doi: 10.1038/scientificamerican0403-78. Sci Am. 2003. PMID: 12661319 No abstract available.
e-Science, caGrid, and Translational Biomedical Research.
Saltz J, Kurc T, Hastings S, Langella S, Oster S, Ervin D, Sharma A, Pan T, Gurcan M, Permar J, Ferreira R, Payne P, Catalyurek U, Caserta E, Leone G, Ostrowski MC, Madduri R, Foster I, Madhavan S, Buetow KH, Shanbhag K, Siegel E. Saltz J, et al. Among authors: foster i. Computer (Long Beach Calif). 2008 Nov;41(11):58-66. doi: 10.1109/MC.2008.459. Computer (Long Beach Calif). 2008. PMID: 21311723 Free PMC article.
Atlas of Transcription Factor Binding Sites from ENCODE DNase Hypersensitivity Data across 27 Tissue Types.
Funk CC, Casella AM, Jung S, Richards MA, Rodriguez A, Shannon P, Donovan-Maiye R, Heavner B, Chard K, Xiao Y, Glusman G, Ertekin-Taner N, Golde TE, Toga A, Hood L, Van Horn JD, Kesselman C, Foster I, Madduri R, Price ND, Ament SA. Funk CC, et al. Among authors: foster i. Cell Rep. 2020 Aug 18;32(7):108029. doi: 10.1016/j.celrep.2020.108029. Cell Rep. 2020. PMID: 32814038 Free PMC article.
137 results