Gupta S - Search Results

1

Modeling transcriptional regulation of the cell cycle using a novel cybernetic-inspired approach.

Raja R, Khanum S, Aboulmouna L, Maurya MR, Gupta S, Subramaniam S, Ramkrishna D. Raja R, et al. Among authors: gupta s. Biophys J. 2024 Jan 16;123(2):221-234. doi: 10.1016/j.bpj.2023.12.010. Epub 2023 Dec 15. Biophys J. 2024. PMID: 38102827 Free article.

2

An integrated model of eicosanoid metabolism and signaling based on lipidomics flux analysis.

Gupta S, Maurya MR, Stephens DL, Dennis EA, Subramaniam S. Gupta S, et al. Biophys J. 2009 Jun 3;96(11):4542-51. doi: 10.1016/j.bpj.2009.03.011. Biophys J. 2009. PMID: 19486676 Free PMC article.

3

Identification of crosstalk between phosphoprotein signaling pathways in RAW 264.7 macrophage cells.

Gupta S, Maurya MR, Subramaniam S. Gupta S, et al. PLoS Comput Biol. 2010 Jan 29;6(1):e1000654. doi: 10.1371/journal.pcbi.1000654. PLoS Comput Biol. 2010. PMID: 20126526 Free PMC article.

4

A mouse macrophage lipidome.

Dennis EA, Deems RA, Harkewicz R, Quehenberger O, Brown HA, Milne SB, Myers DS, Glass CK, Hardiman G, Reichart D, Merrill AH Jr, Sullards MC, Wang E, Murphy RC, Raetz CR, Garrett TA, Guan Z, Ryan AC, Russell DW, McDonald JG, Thompson BM, Shaw WA, Sud M, Zhao Y, Gupta S, Maurya MR, Fahy E, Subramaniam S. Dennis EA, et al. Among authors: gupta s. J Biol Chem. 2010 Dec 17;285(51):39976-85. doi: 10.1074/jbc.M110.182915. Epub 2010 Oct 5. J Biol Chem. 2010. PMID: 20923771 Free PMC article.

5

Integration of lipidomics and transcriptomics data towards a systems biology model of sphingolipid metabolism.

Gupta S, Maurya MR, Merrill AH Jr, Glass CK, Subramaniam S. Gupta S, et al. BMC Syst Biol. 2011 Feb 8;5:26. doi: 10.1186/1752-0509-5-26. BMC Syst Biol. 2011. PMID: 21303545 Free PMC article.

6

Bioinformatics and systems biology of the lipidome.

Subramaniam S, Fahy E, Gupta S, Sud M, Byrnes RW, Cotter D, Dinasarapu AR, Maurya MR. Subramaniam S, et al. Among authors: gupta s. Chem Rev. 2011 Oct 12;111(10):6452-90. doi: 10.1021/cr200295k. Epub 2011 Sep 23. Chem Rev. 2011. PMID: 21939287 Free PMC article. Review. No abstract available.

7

A complement-IL-4 regulatory circuit controls liver regeneration.

DeAngelis RA, Markiewski MM, Kourtzelis I, Rafail S, Syriga M, Sandor A, Maurya MR, Gupta S, Subramaniam S, Lambris JD. DeAngelis RA, et al. Among authors: gupta s. J Immunol. 2012 Jan 15;188(2):641-8. doi: 10.4049/jimmunol.1101925. Epub 2011 Dec 19. J Immunol. 2012. PMID: 22184721 Free PMC article.

8

B-cell ligand processing pathways detected by large-scale comparative analysis.

Towfic F, Gupta S, Honavar V, Subramaniam S. Towfic F, et al. Among authors: gupta s. Genomics Proteomics Bioinformatics. 2012 Jun;10(3):142-52. doi: 10.1016/j.gpb.2012.03.001. Epub 2012 Jun 25. Genomics Proteomics Bioinformatics. 2012. PMID: 22917187 Free PMC article.

9

Analysis of inflammatory and lipid metabolic networks across RAW264.7 and thioglycolate-elicited macrophages.

Maurya MR, Gupta S, Li X, Fahy E, Dinasarapu AR, Sud M, Brown HA, Glass CK, Murphy RC, Russell DW, Dennis EA, Subramaniam S. Maurya MR, et al. Among authors: gupta s. J Lipid Res. 2013 Sep;54(9):2525-42. doi: 10.1194/jlr.M040212. Epub 2013 Jun 17. J Lipid Res. 2013. PMID: 23776196 Free PMC article.

10

A combined omics study on activated macrophages--enhanced role of STATs in apoptosis, immunity and lipid metabolism.

Dinasarapu AR, Gupta S, Ram Maurya M, Fahy E, Min J, Sud M, Gersten MJ, Glass CK, Subramaniam S. Dinasarapu AR, et al. Among authors: gupta s. Bioinformatics. 2013 Nov 1;29(21):2735-43. doi: 10.1093/bioinformatics/btt469. Epub 2013 Aug 26. Bioinformatics. 2013. PMID: 23981351 Free PMC article.

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