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True-T - Improving T-cell response quantification with holistic artificial intelligence based prediction in immunohistochemistry images.
Makhlouf Y, Singh VK, Craig S, McArdle A, French D, Loughrey MB, Oliver N, Acevedo JB, O'Reilly P, James JA, Maxwell P, Salto-Tellez M. Makhlouf Y, et al. Among authors: loughrey mb. Comput Struct Biotechnol J. 2023 Dec 2;23:174-185. doi: 10.1016/j.csbj.2023.11.048. eCollection 2024 Dec. Comput Struct Biotechnol J. 2023. PMID: 38146436 Free PMC article.
Encrypted federated learning for secure decentralized collaboration in cancer image analysis.
Truhn D, Tayebi Arasteh S, Saldanha OL, Müller-Franzes G, Khader F, Quirke P, West NP, Gray R, Hutchins GGA, James JA, Loughrey MB, Salto-Tellez M, Brenner H, Brobeil A, Yuan T, Chang-Claude J, Hoffmeister M, Foersch S, Han T, Keil S, Schulze-Hagen M, Isfort P, Bruners P, Kaissis G, Kuhl C, Nebelung S, Kather JN. Truhn D, et al. Among authors: loughrey mb. Med Image Anal. 2024 Feb;92:103059. doi: 10.1016/j.media.2023.103059. Epub 2023 Dec 7. Med Image Anal. 2024. PMID: 38104402 Free PMC article.
Definitions of Histological Abnormalities in Inflammatory Bowel Disease: an ECCO Position Paper.
Feakins R, Borralho Nunes P, Driessen A, Gordon IO, Zidar N, Baldin P, Christensen B, Danese S, Herlihy N, Iacucci M, Loughrey MB, Magro F, Mookhoek A, Svrcek M, Rosini F. Feakins R, et al. Among authors: loughrey mb. J Crohns Colitis. 2024 Feb 26;18(2):175-191. doi: 10.1093/ecco-jcc/jjad142. J Crohns Colitis. 2024. PMID: 37607017 Free PMC article.
A deep learning approach to case prioritisation of colorectal biopsies.
White CD, Chetty R, Weldon J, Morrissey ME, Sykes R, Gîrleanu C, Colleuori M, Fitzgerald J, Power A, Ahmad A, Carmody S, Moulin P, O'Shea D, Aslam M, Dada MA, Loughrey MB, McManus MC, Nowak KM, McCombe K, Hutton S, Rafferty M, Mulligan N. White CD, et al. Among authors: loughrey mb. Histopathology. 2025 Feb;86(3):373-384. doi: 10.1111/his.15331. Epub 2024 Oct 3. Histopathology. 2025. PMID: 39360579
What factors influence cellular pathologists' confidence in case reporting?
Evans H, Kimani PK, Hiller L, Tsang YW, Sah S, Gopalakrishnan K, Boyd C, Loughrey MB, Kelly PJ, Boyle DP, Clark D, Ellis IO, Ilyas M, Rakha E, Bickers A, Roberts ISD, Soares MF, Neil DAH, Dunn JA, Azam A, Snead D. Evans H, et al. Among authors: loughrey mb. Virchows Arch. 2024 Aug 17. doi: 10.1007/s00428-024-03899-1. Online ahead of print. Virchows Arch. 2024. PMID: 39153110
Low coverage whole genome sequencing of low-grade dysplasia strongly predicts colorectal cancer risk in ulcerative colitis.
Al Bakir I, Curtius K, Cresswell GD, Grant HE, Nasreddin N, Smith K, Nowinski S, Guo Q, Belnoue-Davis HL, Fisher J, Clarke T, Kimberley C, Mossner M, Dunne PD, Loughrey MB, Speight A, East JE, Wright NA, Rodriguez-Justo M, Jansen M, Moorghen M, Baker AM, Leedham SJ, Hart AL, Graham TA. Al Bakir I, et al. Among authors: loughrey mb. medRxiv [Preprint]. 2024 Jul 8:2024.07.08.24309811. doi: 10.1101/2024.07.08.24309811. medRxiv. 2024. PMID: 39040198 Free PMC article. Preprint.
Author Correction: Pathway level subtyping identifies a slow-cycling biological phenotype associated with poor clinical outcomes in colorectal cancer.
Malla SB, Byrne RM, Lafarge MW, Corry SM, Fisher NC, Tsantoulis PK, Mills ML, Ridgway RA, Lannagan TRM, Najumudeen AK, Gilroy KL, Amirkhah R, Maguire SL, Mulholland EJ, Belnoue-Davis HL, Grassi E, Viviani M, Rogan E, Redmond KL, Sakhnevych S, McCooey AJ, Bull C, Hoey E, Sinevici N, Hall H, Ahmaderaghi B, Domingo E, Blake A, Richman SD, Isella C, Miller C, Bertotti A, Trusolino L, Loughrey MB, Kerr EM, Tejpar S; S:CORT consortium; Maughan TS, Lawler M, Campbell AD, Leedham SJ, Koelzer VH, Sansom OJ, Dunne PD. Malla SB, et al. Among authors: loughrey mb. Nat Genet. 2024 Jun;56(6):1321. doi: 10.1038/s41588-024-01809-4. Nat Genet. 2024. PMID: 38831011 Free PMC article. No abstract available.
108 results