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Evaluation of FluSight influenza forecasting in the 2021-22 and 2022-23 seasons with a new target laboratory-confirmed influenza hospitalizations.
Mathis SM, Webber AE, León TM, Murray EL, Sun M, White LA, Brooks LC, Green A, Hu AJ, McDonald DJ, Rosenfeld R, Shemetov D, Tibshirani RJ, Kandula S, Pei S, Shaman J, Yaari R, Yamana TK, Agarwal P, Balusu S, Gururajan G, Kamarthi H, Prakash BA, Raman R, Rodríguez A, Zhao Z, Meiyappan A, Omar S, Baccam P, Gurung HL, Stage SA, Suchoski BT, Ajelli M, Kummer AG, Litvinova M, Ventura PC, Wadsworth S, Niemi J, Carcelen E, Hill AL, Jung SM, Lemaitre JC, Lessler J, Loo SL, McKee CD, Sato K, Smith C, Truelove S, McAndrew T, Ye W, Bosse N, Hlavacek WS, Lin YT, Mallela A, Chen Y, Lamm SM, Lee J, Posner RG, Perofsky AC, Viboud C, Clemente L, Lu F, Meyer AG, Santillana M, Chinazzi M, Davis JT, Mu K, Piontti APY, Vespignani A, Xiong X, Ben-Nun M, Riley P, Turtle J, Hulme-Lowe C, Jessa S, Nagraj VP, Turner SD, Williams D, Basu A, Drake JM, Fox SJ, Gibson GC, Suez E, Thommes EW, Cojocaru MG, Cramer EY, Gerding A, Stark A, Ray EL, Reich NG, Shandross L, Wattanachit N, Wang Y, Zorn MW, Al Aawar M, Srivastava A, Meyers LA, Adiga A, Hurt B, Kaur G, Lewis BL, Marathe M, Venkatramanan S, Butler P, Farabow A, Muralidhar N, Ramakrishnan N, Reed C, Biggerstaff M, Borchering RK. Mathis SM, et al. Among authors: rosenfeld r. medRxiv [Preprint]. 2023 Dec 11:2023.12.08.23299726. doi: 10.1101/2023.12.08.23299726. medRxiv. 2023. Update in: Nat Commun. 2024 Jul 26;15(1):6289. doi: 10.1038/s41467-024-50601-9 PMID: 38168429 Free PMC article. Updated. Preprint.
Flexible Modeling of Epidemics with an Empirical Bayes Framework.
Brooks LC, Farrow DC, Hyun S, Tibshirani RJ, Rosenfeld R. Brooks LC, et al. Among authors: rosenfeld r. PLoS Comput Biol. 2015 Aug 28;11(8):e1004382. doi: 10.1371/journal.pcbi.1004382. eCollection 2015 Aug. PLoS Comput Biol. 2015. PMID: 26317693 Free PMC article.
Results from the centers for disease control and prevention's predict the 2013-2014 Influenza Season Challenge.
Biggerstaff M, Alper D, Dredze M, Fox S, Fung IC, Hickmann KS, Lewis B, Rosenfeld R, Shaman J, Tsou MH, Velardi P, Vespignani A, Finelli L; Influenza Forecasting Contest Working Group. Biggerstaff M, et al. Among authors: rosenfeld r. BMC Infect Dis. 2016 Jul 22;16:357. doi: 10.1186/s12879-016-1669-x. BMC Infect Dis. 2016. PMID: 27449080 Free PMC article.
A human judgment approach to epidemiological forecasting.
Farrow DC, Brooks LC, Hyun S, Tibshirani RJ, Burke DS, Rosenfeld R. Farrow DC, et al. Among authors: rosenfeld r. PLoS Comput Biol. 2017 Mar 10;13(3):e1005248. doi: 10.1371/journal.pcbi.1005248. eCollection 2017 Mar. PLoS Comput Biol. 2017. PMID: 28282375 Free PMC article.
Results from the second year of a collaborative effort to forecast influenza seasons in the United States.
Biggerstaff M, Johansson M, Alper D, Brooks LC, Chakraborty P, Farrow DC, Hyun S, Kandula S, McGowan C, Ramakrishnan N, Rosenfeld R, Shaman J, Tibshirani R, Tibshirani RJ, Vespignani A, Yang W, Zhang Q, Reed C. Biggerstaff M, et al. Among authors: rosenfeld r. Epidemics. 2018 Sep;24:26-33. doi: 10.1016/j.epidem.2018.02.003. Epub 2018 Feb 24. Epidemics. 2018. PMID: 29506911 Free PMC article.
A collaborative multiyear, multimodel assessment of seasonal influenza forecasting in the United States.
Reich NG, Brooks LC, Fox SJ, Kandula S, McGowan CJ, Moore E, Osthus D, Ray EL, Tushar A, Yamana TK, Biggerstaff M, Johansson MA, Rosenfeld R, Shaman J. Reich NG, et al. Among authors: rosenfeld r. Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):3146-3154. doi: 10.1073/pnas.1812594116. Epub 2019 Jan 15. Proc Natl Acad Sci U S A. 2019. PMID: 30647115 Free PMC article.
Collaborative efforts to forecast seasonal influenza in the United States, 2015-2016.
McGowan CJ, Biggerstaff M, Johansson M, Apfeldorf KM, Ben-Nun M, Brooks L, Convertino M, Erraguntla M, Farrow DC, Freeze J, Ghosh S, Hyun S, Kandula S, Lega J, Liu Y, Michaud N, Morita H, Niemi J, Ramakrishnan N, Ray EL, Reich NG, Riley P, Shaman J, Tibshirani R, Vespignani A, Zhang Q, Reed C; Influenza Forecasting Working Group. McGowan CJ, et al. Sci Rep. 2019 Jan 24;9(1):683. doi: 10.1038/s41598-018-36361-9. Sci Rep. 2019. PMID: 30679458 Free PMC article.
1,172 results