Bray DJ - Search Results

1

Lipid shape and packing are key for optimal design of pH-sensitive mRNA lipid nanoparticles.

Tesei G, Hsiao YW, Dabkowska A, Grönberg G, Yanez Arteta M, Ulkoski D, Bray DJ, Trulsson M, Ulander J, Lund M, Lindfors L. Tesei G, et al. Among authors: bray dj. Proc Natl Acad Sci U S A. 2024 Jan 9;121(2):e2311700120. doi: 10.1073/pnas.2311700120. Epub 2024 Jan 4. Proc Natl Acad Sci U S A. 2024. PMID: 38175863 Free PMC article.

2

Structure adaptation in Omicron SARS-CoV-2/hACE2: Biophysical origins of evolutionary driving forces.

Hsiao YW, Bray DJ, Taddese T, Jiménez-Serratos G, Crain J. Hsiao YW, et al. Among authors: bray dj. Biophys J. 2023 Oct 17;122(20):4057-4067. doi: 10.1016/j.bpj.2023.09.003. Epub 2023 Sep 16. Biophys J. 2023. PMID: 37717145 Free PMC article.

3

A Nonlinear Peptide Topology for Synthetic Virions.

Noble JE, Hsiao YW, Kepiro IE, De Santis E, Hoose A, Augagneur C, Lamarre B, Briones A, Hammond K, Bray DJ, Crain J, Ryadnov MG. Noble JE, et al. Among authors: bray dj. ACS Nano. 2024 Oct 29;18(43):29956-29967. doi: 10.1021/acsnano.4c10662. Epub 2024 Oct 14. ACS Nano. 2024. PMID: 39402499

4

Phase Behavior of Alkyl Ethoxylate Surfactants in a Dissipative Particle Dynamics Model.

Anderson RL, Gunn DSD, Taddese T, Lavagnini E, Warren PB, Bray DJ. Anderson RL, et al. Among authors: bray dj. J Phys Chem B. 2023 Feb 23;127(7):1674-1687. doi: 10.1021/acs.jpcb.2c08834. Epub 2023 Feb 14. J Phys Chem B. 2023. PMID: 36786752 Free PMC article.

5

Utilizing Machine Learning for Efficient Parameterization of Coarse Grained Molecular Force Fields.

McDonagh JL, Shkurti A, Bray DJ, Anderson RL, Pyzer-Knapp EO. McDonagh JL, et al. Among authors: bray dj. J Chem Inf Model. 2019 Oct 28;59(10):4278-4288. doi: 10.1021/acs.jcim.9b00646. Epub 2019 Sep 27. J Chem Inf Model. 2019. PMID: 31549507

6

Can Machine Learning Predict the Phase Behavior of Surfactants?

Thacker JCR, Bray DJ, Warren PB, Anderson RL. Thacker JCR, et al. Among authors: bray dj. J Phys Chem B. 2023 Apr 27;127(16):3711-3727. doi: 10.1021/acs.jpcb.2c08232. Epub 2023 Apr 12. J Phys Chem B. 2023. PMID: 37043304 Free PMC article.

7

Critical Micelle Concentrations in Surfactant Mixtures and Blends by Simulation.

Del Regno A, Warren PB, Bray DJ, Anderson RL. Del Regno A, et al. Among authors: bray dj. J Phys Chem B. 2021 Jun 10;125(22):5983-5990. doi: 10.1021/acs.jpcb.1c00893. Epub 2021 May 27. J Phys Chem B. 2021. PMID: 34043913 Free article.

8

Micelle Formation in Alkyl Sulfate Surfactants Using Dissipative Particle Dynamics.

Anderson RL, Bray DJ, Del Regno A, Seaton MA, Ferrante AS, Warren PB. Anderson RL, et al. Among authors: bray dj. J Chem Theory Comput. 2018 May 8;14(5):2633-2643. doi: 10.1021/acs.jctc.8b00075. Epub 2018 Apr 13. J Chem Theory Comput. 2018. PMID: 29570296

9

Modeling Alkyl Aromatic Hydrocarbons with Dissipative Particle Dynamics.

Bray DJ, Anderson RL, Warren PB, Lewtas K. Bray DJ, et al. J Phys Chem B. 2022 Jul 21;126(28):5351-5361. doi: 10.1021/acs.jpcb.2c02048. Epub 2022 Jul 7. J Phys Chem B. 2022. PMID: 35797469 Free PMC article.

10

Efficient Algorithm for the Topological Characterization of Worm-like and Branched Micelle Structures from Simulations.

Conchuir BO, Gardner K, Jordan KE, Bray DJ, Anderson RL, Johnston MA, Swope WC, Harrison A, Sheehy DR, Peters TJ. Conchuir BO, et al. Among authors: bray dj. J Chem Theory Comput. 2020 Jul 14;16(7):4588-4598. doi: 10.1021/acs.jctc.0c00311. Epub 2020 Jul 1. J Chem Theory Comput. 2020. PMID: 32543855

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