Kelley ST - Search Results

1

Data-driven mathematical and visualization approaches for removing rare features for Compositional Data Analysis (CoDA).

Ortiz-Velez A, Kelley ST. Ortiz-Velez A, et al. Among authors: kelley st. NAR Genom Bioinform. 2024 Jan 5;6(1):lqad110. doi: 10.1093/nargab/lqad110. eCollection 2024 Mar. NAR Genom Bioinform. 2024. PMID: 38187087 Free PMC article.

2

An application of compositional data analysis to multiomic time-series data.

Sisk-Hackworth L, Kelley ST. Sisk-Hackworth L, et al. Among authors: kelley st. NAR Genom Bioinform. 2020 Oct 2;2(4):lqaa079. doi: 10.1093/nargab/lqaa079. eCollection 2020 Dec. NAR Genom Bioinform. 2020. PMID: 33575625 Free PMC article.

3

Compositional Data Analysis of Periodontal Disease Microbial Communities.

Sisk-Hackworth L, Ortiz-Velez A, Reed MB, Kelley ST. Sisk-Hackworth L, et al. Among authors: kelley st. Front Microbiol. 2021 May 17;12:617949. doi: 10.3389/fmicb.2021.617949. eCollection 2021. Front Microbiol. 2021. PMID: 34079525 Free PMC article.

4

AutoPhy: Automated phylogenetic identification of novel protein subfamilies.

Ortiz-Velez AN, Sukumaran J, Rouzbehani R, Kelley ST. Ortiz-Velez AN, et al. Among authors: kelley st. PLoS One. 2024 Jan 11;19(1):e0291801. doi: 10.1371/journal.pone.0291801. eCollection 2024. PLoS One. 2024. PMID: 38206953 Free PMC article.

5

Meta-SourceTracker: application of Bayesian source tracking to shotgun metagenomics.

McGhee JJ, Rawson N, Bailey BA, Fernandez-Guerra A, Sisk-Hackworth L, Kelley ST. McGhee JJ, et al. Among authors: kelley st. PeerJ. 2020 Mar 24;8:e8783. doi: 10.7717/peerj.8783. eCollection 2020. PeerJ. 2020. PMID: 32231882 Free PMC article.

6

Gut Metabolites Are More Predictive of Disease and Cohoused States than Gut Bacterial Features in a Polycystic Ovary Syndrome-Like Mouse Model.

Ho B, Ryback D, Benson B, Mason CN, Torres PJ, Quinn RA, Thackray VG, Kelley ST. Ho B, et al. Among authors: kelley st. mSystems. 2021 Oct 26;6(5):e0114920. doi: 10.1128/mSystems.01149-20. Epub 2021 Sep 14. mSystems. 2021. PMID: 34519532 Free PMC article.

7

Automated high confidence compound identification of electron ionization mass spectra for nontargeted analysis.

Bendik J, Kalia R, Sukumaran J, Richardot WH, Hoh E, Kelley ST. Bendik J, et al. Among authors: kelley st. J Chromatogr A. 2021 Dec 20;1660:462656. doi: 10.1016/j.chroma.2021.462656. Epub 2021 Oct 31. J Chromatogr A. 2021. PMID: 34798444 Free article.

8

Association of phosphodiesterase 4 polymorphism (rs702553) with blood pressure in the African American Study of Kidney Disease and Hypertension Genomics Study.

Anthony EG, Richard E, Lipkowitz MS, Kelley ST, Alcaraz JE, Shaffer RA, Bhatnagar V. Anthony EG, et al. Among authors: kelley st. Pharmacogenet Genomics. 2013 Aug;23(8):442-4. doi: 10.1097/FPC.0b013e3283636840. Pharmacogenet Genomics. 2013. PMID: 23778321

9

Metagenomic Analysis of Microbial Contamination in the U.S. Portion of the Tijuana River Watershed.

Allsing N, Kelley ST, Fox AN, Sant KE. Allsing N, et al. Among authors: kelley st. Int J Environ Res Public Health. 2022 Dec 29;20(1):600. doi: 10.3390/ijerph20010600. Int J Environ Res Public Health. 2022. PMID: 36612923 Free PMC article.

10

Effects of moderate, voluntary ethanol consumption on the rat and human gut microbiome.

Kosnicki KL, Penprase JC, Cintora P, Torres PJ, Harris GL, Brasser SM, Kelley ST. Kosnicki KL, et al. Among authors: kelley st. Addict Biol. 2019 Jul;24(4):617-630. doi: 10.1111/adb.12626. Epub 2018 May 11. Addict Biol. 2019. PMID: 29750384 Free PMC article.

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