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Inferring transcription factor complexes from ChIP-seq data.
Whitington T, Frith MC, Johnson J, Bailey TL. Whitington T, et al. Among authors: johnson j. Nucleic Acids Res. 2011 Aug;39(15):e98. doi: 10.1093/nar/gkr341. Epub 2011 May 20. Nucleic Acids Res. 2011. PMID: 21602262 Free PMC article.
MCAST: scanning for cis-regulatory motif clusters.
Grant CE, Johnson J, Bailey TL, Noble WS. Grant CE, et al. Among authors: johnson j. Bioinformatics. 2016 Apr 15;32(8):1217-9. doi: 10.1093/bioinformatics/btv750. Epub 2015 Dec 24. Bioinformatics. 2016. PMID: 26704599 Free PMC article.
The MEME Suite.
Bailey TL, Johnson J, Grant CE, Noble WS. Bailey TL, et al. Among authors: johnson j. Nucleic Acids Res. 2015 Jul 1;43(W1):W39-49. doi: 10.1093/nar/gkv416. Epub 2015 May 7. Nucleic Acids Res. 2015. PMID: 25953851 Free PMC article.
Formal Dearomative Hydroamination of 2-Arylphenols.
Wiley RE, Eng MC, Clarkson AJ, Johnson JS. Wiley RE, et al. Among authors: johnson js. J Org Chem. 2024 Dec 20. doi: 10.1021/acs.joc.4c02654. Online ahead of print. J Org Chem. 2024. PMID: 39704360
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