RTExtract: time-series NMR spectra quantification based on 3D surface ridge tracking.
Wu Y, Judge MT, Arnold J, Bhandarkar SM, Edison AS.
Wu Y, et al. Among authors: edison as.
Bioinformatics. 2020 Dec 22;36(20):5068-5075. doi: 10.1093/bioinformatics/btaa631.
Bioinformatics. 2020.
PMID: 32653900
Free PMC article.
The NMR spectra of multiple time points were formulated as a 3D surface. Candidate points were first filtered using local curvature and optima, then connected into ridges by a greedy algorithm. ...AVAILABILITY AND IMPLEMENTATION: Source code is freely available within Meta …
The NMR spectra of multiple time points were formulated as a 3D surface. Candidate points were first filtered using local curvature a …