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mSigSDK - private, at scale, computation of mutation signatures.
Ge A, Zhang T, Martins YC, Landi MT, Park B, Chen K, Balasubramanian J, Almeida JS. Ge A, et al. Among authors: landi mt. ArXiv [Preprint]. 2024 Jan 19:arXiv:2308.02995v2. ArXiv. 2024. PMID: 38327678 Free PMC article. Preprint.
The mutagenic forces shaping the genomic landscape of lung cancer in never smokers.
Díaz-Gay M, Zhang T, Hoang PH, Khandekar A, Zhao W, Steele CD, Otlu B, Nandi SP, Vangara R, Bergstrom EN, Kazachkova M, Pich O, Swanton C, Hsiung CA, Chang IS, Wong MP, Leung KC, Sang J, McElderry J, Yang L, Nowak MA, Shi J, Rothman N, Wedge DC, Homer R, Yang SR, Lan Q, Zhu B, Chanock SJ, Alexandrov LB, Landi MT. Díaz-Gay M, et al. Among authors: landi mt. medRxiv [Preprint]. 2024 May 17:2024.05.15.24307318. doi: 10.1101/2024.05.15.24307318. medRxiv. 2024. PMID: 38798417 Free PMC article. Preprint.
APOBEC shapes tumor evolution and age at onset of lung cancer in smokers.
Zhang T, Sang J, Hoang PH, Zhao W, Rosenbaum J, Johnson KE, Klimczak LJ, McElderry J, Klein A, Wirth C, Bergstrom EN, Díaz-Gay M, Vangara R, Colon-Matos F, Hutchinson A, Lawrence SM, Cole N, Zhu B, Przytycka TM, Shi J, Caporaso NE, Homer R, Pesatori AC, Consonni D, Imielinski M, Chanock SJ, Wedge DC, Gordenin DA, Alexandrov LB, Harris RS, Landi MT. Zhang T, et al. Among authors: landi mt. bioRxiv [Preprint]. 2024 Apr 3:2024.04.02.587805. doi: 10.1101/2024.04.02.587805. bioRxiv. 2024. PMID: 38617360 Free PMC article. Preprint.
Mapping chromatin interactions at melanoma susceptibility loci and cell-type specific dataset integration uncovers distant gene targets of cis -regulation.
Thakur R, Xu M, Sowards H, Yon J, Jessop L, Myers T, Zhang T, Chari R, Long E, Rehling T, Hennessey R, Funderburk K, Yin J, Machiela MJ, Johnson ME, Wells AD, Chesi A, Grant SFA, Iles MM, Landi MT, Law MH; Melanoma Meta-Analysis Consortium; Choi J, Brown KM. Thakur R, et al. Among authors: landi mt. medRxiv [Preprint]. 2024 Nov 15:2024.11.14.24317204. doi: 10.1101/2024.11.14.24317204. medRxiv. 2024. PMID: 39802764 Free PMC article. Preprint.
Polygenic Risk Score and Lung Adenocarcinoma Risk Among Never-Smokers by EGFR Mutation Status: A Brief Report.
Blechter B, Hsiung CA, Wang X, Zhang H, Seow WJ, Shi J, Chatterjee N, Kim HN, Wong MP, Hong YC, Wong JYY, Dai J, Hosgood HD, Wang Z, Chang IS, Choi J, Wang J, Song M, Hu W, Zheng W, Kim JH, Zhou B, Albanes D, Shin MH, Chung LP, An SJ, Zheng H, Yatabe Y, Zhang XC, Kim YT, Shu XO, Kim YC, Vermeulen RCH, Bassig BA, Chang J, Man Ho JC, Ji BT, Kubo M, Daigo Y, Momozawa Y, Kamatani Y, Honda T, Kunitoh H, Watanabe SI, Miyagi Y, Nakayama H, Matsumoto S, Tsuboi M, Goto K, Yin Z, Takahashi A, Goto A, Minamiya Y, Shimizu K, Tanaka K, Wu T, Wei F, Su J, Kim YH, Oh IJ, Fun Lee VH, Su WC, Chen YM, Chang GC, Chen KY, Huang MS, Lin HC, Seow A, Park JY, Kweon SS, Chen CJ, Gao YT, Wu C, Qian B, Lu D, Liu J, Jeon HS, Hsiao CF, Sung JS, Tsai YH, Jung YJ, Guo H, Hu Z, Chen TY, Burdett L, Yeager M, Hutchinson A, Berndt SI, Wu W, Wang J, Choi JE, Park KH, Sung SW, Liu L, Kang CH, Chen CH, Xu J, Guan P, Tan W, Wang CL, Loon Sihoe AD, Chen Y, Choi YY, Kim JS, Yoon HI, Cai Q, Park IK, Xu P, He Q, Chen CY, Wu J, Lim WY, Chen KC, Chan JKC, Li J, Chen H, Yu CJ, Jin L, Fraumeni JF Jr, Liu J, Landi MT, Yamaji T, Yang Y, Hicks B, Wyatt K, Li SA, Ma H, Song B, Wang Z, Cheng S, Li X, Ren Y, Iwasaki M, Zhu J… See abstract for full author list ➔ Blechter B, et al. Among authors: landi mt. J Thorac Oncol. 2024 Nov 22:S1556-0864(24)02482-1. doi: 10.1016/j.jtho.2024.11.019. Online ahead of print. J Thorac Oncol. 2024. PMID: 39581378
Author Correction: Context-aware single-cell multiomics approach identifies cell-type-specific lung cancer susceptibility genes.
Long E, Yin J, Shin JH, Li Y, Li B, Kane A, Patel H, Sun X, Wang C, Luong T, Xia J, Han Y, Byun J, Zhang T, Zhao W, Landi MT, Rothman N, Lan Q, Chang YS, Yu F, Amos CI, Shi J, Lee JG, Kim EY, Choi J. Long E, et al. Among authors: landi mt. Nat Commun. 2024 Nov 18;15(1):9969. doi: 10.1038/s41467-024-54396-7. Nat Commun. 2024. PMID: 39557929 Free PMC article. No abstract available.
Socioeconomic status, smoking, and lung cancer: mediation and bias analysis in the SYNERGY study.
Hovanec J, Kendzia B, Olsson A, Schüz J, Kromhout H, Vermeulen R, Peters S, Gustavsson P, Migliore E, Radoi L, Barul C, Consonni D, Caporaso NE, Landi MT, Field JK, Karrasch S, Wichmann HE, Siemiatycki J, Parent ME, Richiardi L, Simonato L, Jöckel KH, Ahrens W, Pohlabeln H, Fernández-Tardón G, Zaridze D, McLaughlin JR, Demers PA, Świątkowska B, Lissowska J, Pándics T, Fabianova E, Mates D, Schejbalova M, Foretova L, Janout V, Boffetta P, Forastiere F, Straif K, Brüning T, Behrens T. Hovanec J, et al. Among authors: landi mt. Epidemiology. 2024 Oct 22. doi: 10.1097/EDE.0000000000001807. Online ahead of print. Epidemiology. 2024. PMID: 39435907
Association of MC1R variants with melanoma risk and interaction with sun exposure: An M-SKIP project.
Stefanaki I, D'Ecclesiis O, Vignati S, Gaeta A, Kypreou K, Caini S, Gandini S, Nagore E, Sera F, Botta F, Newton-Bishop J, Polsky D, Lazovich D, Kanetsky PA, Puig S, Gruis NA, Landi MT, Fargnoli MC, Stratigos A, Guida G, Ghiorzo P, Menin C, García-Borrón JC, Little J, Nan H, Raimondi S; M‐SKIP study group. Stefanaki I, et al. Among authors: landi mt. J Eur Acad Dermatol Venereol. 2024 Oct 19. doi: 10.1111/jdv.20380. Online ahead of print. J Eur Acad Dermatol Venereol. 2024. PMID: 39425518 No abstract available.
367 results