Stam M - Search Results

1

RNA-directed DNA methylation mutants reduce histone methylation at the paramutated maize booster1 enhancer.

Hövel I, Bader R, Louwers M, Haring M, Peek K, Gent JI, Stam M. Hövel I, et al. Among authors: stam m. Plant Physiol. 2024 May 31;195(2):1161-1179. doi: 10.1093/plphys/kiae072. Plant Physiol. 2024. PMID: 38366582 Free PMC article.

2

Chromatin immunoprecipitation: optimization, quantitative analysis and data normalization.

Haring M, Offermann S, Danker T, Horst I, Peterhansel C, Stam M. Haring M, et al. Among authors: stam m. Plant Methods. 2007 Sep 24;3:11. doi: 10.1186/1746-4811-3-11. Plant Methods. 2007. PMID: 17892552 Free PMC article.

3

Tissue- and expression level-specific chromatin looping at maize b1 epialleles.

Louwers M, Bader R, Haring M, van Driel R, de Laat W, Stam M. Louwers M, et al. Among authors: stam m. Plant Cell. 2009 Mar;21(3):832-42. doi: 10.1105/tpc.108.064329. Epub 2009 Mar 31. Plant Cell. 2009. PMID: 19336692 Free PMC article.

4

Studying physical chromatin interactions in plants using Chromosome Conformation Capture (3C).

Louwers M, Splinter E, van Driel R, de Laat W, Stam M. Louwers M, et al. Among authors: stam m. Nat Protoc. 2009;4(8):1216-29. doi: 10.1038/nprot.2009.113. Epub 2009 Jul 30. Nat Protoc. 2009. PMID: 19644461

5

The role of DNA methylation, nucleosome occupancy and histone modifications in paramutation.

Haring M, Bader R, Louwers M, Schwabe A, van Driel R, Stam M. Haring M, et al. Among authors: stam m. Plant J. 2010 Aug;63(3):366-78. doi: 10.1111/j.1365-313X.2010.04245.x. Epub 2010 Apr 29. Plant J. 2010. PMID: 20444233 Free article.

6

3C Technologies in plants.

Hövel I, Louwers M, Stam M. Hövel I, et al. Among authors: stam m. Methods. 2012 Nov;58(3):204-11. doi: 10.1016/j.ymeth.2012.06.010. Epub 2012 Jun 19. Methods. 2012. PMID: 22728034

7

Specific tandem repeats are sufficient for paramutation-induced trans-generational silencing.

Belele CL, Sidorenko L, Stam M, Bader R, Arteaga-Vazquez MA, Chandler VL. Belele CL, et al. Among authors: stam m. PLoS Genet. 2013;9(10):e1003773. doi: 10.1371/journal.pgen.1003773. Epub 2013 Oct 17. PLoS Genet. 2013. PMID: 24146624 Free PMC article.

8

Accessible DNA and relative depletion of H3K9me2 at maize loci undergoing RNA-directed DNA methylation.

Gent JI, Madzima TF, Bader R, Kent MR, Zhang X, Stam M, McGinnis KM, Dawe RK. Gent JI, et al. Among authors: stam m. Plant Cell. 2014 Dec;26(12):4903-17. doi: 10.1105/tpc.114.130427. Epub 2014 Dec 2. Plant Cell. 2014. PMID: 25465407 Free PMC article.

9

Cis-acting determinants of paramutation.

Hövel I, Pearson NA, Stam M. Hövel I, et al. Among authors: stam m. Semin Cell Dev Biol. 2015 Aug;44:22-32. doi: 10.1016/j.semcdb.2015.08.012. Epub 2015 Aug 29. Semin Cell Dev Biol. 2015. PMID: 26321497 Review.

10

Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize.

Oka R, Zicola J, Weber B, Anderson SN, Hodgman C, Gent JI, Wesselink JJ, Springer NM, Hoefsloot HCJ, Turck F, Stam M. Oka R, et al. Among authors: stam m. Genome Biol. 2017 Jul 21;18(1):137. doi: 10.1186/s13059-017-1273-4. Genome Biol. 2017. PMID: 28732548 Free PMC article.

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