Orr G - Search Results

1

Cell-type-specific transcriptomics uncovers spatial regulatory networks in bioenergy sorghum stems.

Fu J, McKinley B, James B, Chrisler W, Markillie LM, Gaffrey MJ, Mitchell HD, Riaz MR, Marcial B, Orr G, Swaminathan K, Mullet J, Marshall-Colon A. Fu J, et al. Among authors: orr g. Plant J. 2024 Jun;118(5):1668-1688. doi: 10.1111/tpj.16690. Epub 2024 Feb 26. Plant J. 2024. PMID: 38407828

2

Capturing an Early Gene Induction Event during Wood Decay by the Brown Rot Fungus Rhodonia placenta.

Anderson CE, Zhang J, Markillie LM, Mitchell HD, Chrisler WB, Gaffrey MJ, Orr G, Schilling JS. Anderson CE, et al. Among authors: orr g. Appl Environ Microbiol. 2022 Apr 26;88(8):e0018822. doi: 10.1128/aem.00188-22. Epub 2022 Mar 29. Appl Environ Microbiol. 2022. PMID: 35348388 Free PMC article.

3

Cells Respond to Distinct Nanoparticle Properties with Multiple Strategies As Revealed by Single-Cell RNA-Seq.

Mitchell HD, Markillie LM, Chrisler WB, Gaffrey MJ, Hu D, Szymanski CJ, Xie Y, Melby ES, Dohnalkova A, Taylor RC, Grate EK, Cooley SK, McDermott JE, Heredia-Langner A, Orr G. Mitchell HD, et al. Among authors: orr g. ACS Nano. 2016 Nov 22;10(11):10173-10185. doi: 10.1021/acsnano.6b05452. Epub 2016 Oct 31. ACS Nano. 2016. PMID: 27788331

4

Reference genes for accurate normalization of gene expression in wood-decomposing fungi.

Zhang J, Mitchell HD, Markillie LM, Gaffrey MJ, Orr G, Schilling J. Zhang J, et al. Among authors: orr g. Fungal Genet Biol. 2019 Feb;123:33-40. doi: 10.1016/j.fgb.2018.11.005. Epub 2018 Dec 5. Fungal Genet Biol. 2019. PMID: 30529285

5

Counting mRNA Copies in Intact Bacterial Cells by Fluctuation Localization Imaging-Based Fluorescence In Situ Hybridization (fliFISH).

Hu D, Cui Y, Markillie LM, Chrisler WB, Wang Q, Hatzenpichler R, Orr G. Hu D, et al. Among authors: orr g. Methods Mol Biol. 2021;2246:237-247. doi: 10.1007/978-1-0716-1115-9_15. Methods Mol Biol. 2021. PMID: 33576993

6

Distinctive carbon repression effects in the carbohydrate-selective wood decay fungus Rhodonia placenta.

Zhang J, Meng Markillie L, Mitchell HD, Gaffrey MJ, Orr G, Schilling JS. Zhang J, et al. Among authors: orr g. Fungal Genet Biol. 2022 Apr;159:103673. doi: 10.1016/j.fgb.2022.103673. Epub 2022 Feb 9. Fungal Genet Biol. 2022. PMID: 35150839 Free article.

7

Fluctuation localization imaging-based fluorescence in situ hybridization (fliFISH) for accurate detection and counting of RNA copies in single cells.

Cui Y, Hu D, Markillie LM, Chrisler WB, Gaffrey MJ, Ansong C, Sussel L, Orr G. Cui Y, et al. Among authors: orr g. Nucleic Acids Res. 2018 Jan 25;46(2):e7. doi: 10.1093/nar/gkx874. Nucleic Acids Res. 2018. PMID: 29040675 Free PMC article.

8

Rosette core fungal resistance in Arabidopsis thaliana.

Dai Y, Ogilvie HA, Liu Y, Huang M, Markillie LM, Mitchell HD, Borrego EJ, Kolomiets MV, Gaffrey MJ, Orr G, Chehab EW, Mao WT, Braam J. Dai Y, et al. Among authors: orr g. Planta. 2019 Dec;250(6):1941-1953. doi: 10.1007/s00425-019-03273-5. Epub 2019 Sep 16. Planta. 2019. PMID: 31529398

9

Multi-time series RNA-seq analysis of Enterobacter lignolyticus SCF1 during growth in lignin-amended medium.

Orellana R, Chaput G, Markillie LM, Mitchell H, Gaffrey M, Orr G, DeAngelis KM. Orellana R, et al. Among authors: orr g. PLoS One. 2017 Oct 19;12(10):e0186440. doi: 10.1371/journal.pone.0186440. eCollection 2017. PLoS One. 2017. PMID: 29049419 Free PMC article.

10

Cellular recognition and trafficking of amorphous silica nanoparticles by macrophage scavenger receptor A.

Orr GA, Chrisler WB, Cassens KJ, Tan R, Tarasevich BJ, Markillie LM, Zangar RC, Thrall BD. Orr GA, et al. Nanotoxicology. 2011 Sep;5(3):296-311. doi: 10.3109/17435390.2010.513836. Epub 2010 Sep 17. Nanotoxicology. 2011. PMID: 20849212

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