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Recommendations for accelerating open preprint peer review to improve the culture of science.
Avissar-Whiting M, Belliard F, Bertozzi SM, Brand A, Brown K, Clément-Stoneham G, Dawson S, Dey G, Ecer D, Edmunds SC, Farley A, Fischer TD, Franko M, Fraser JS, Funk K, Ganier C, Harrison M, Hatch A, Hazlett H, Hindle S, Hook DW, Hurst P, Kamoun S, Kiley R, Lacy MM, LaFlamme M, Lawrence R, Lemberger T, Leptin M, Lumb E, MacCallum CJ, Marcum CS, Marinello G, Mendonça A, Monaco S, Neves K, Pattinson D, Polka JK, Puebla I, Rittman M, Royle SJ, Saderi D, Sever R, Shearer K, Spiro JE, Stern B, Taraborelli D, Vale R, Vasquez CG, Waltman L, Watt FM, Weinberg ZY, Williams M. Avissar-Whiting M, et al. Among authors: fraser js. PLoS Biol. 2024 Feb 29;22(2):e3002502. doi: 10.1371/journal.pbio.3002502. eCollection 2024 Feb. PLoS Biol. 2024. PMID: 38421949 Free PMC article.
SCIENTIFIC COMMUNITY. Preprints for the life sciences.
Berg JM, Bhalla N, Bourne PE, Chalfie M, Drubin DG, Fraser JS, Greider CW, Hendricks M, Jones C, Kiley R, King S, Kirschner MW, Krumholz HM, Lehmann R, Leptin M, Pulverer B, Rosenzweig B, Spiro JE, Stebbins M, Strasser C, Swaminathan S, Turner P, Vale RD, VijayRaghavan K, Wolberger C. Berg JM, et al. Among authors: fraser js. Science. 2016 May 20;352(6288):899-901. doi: 10.1126/science.aaf9133. Science. 2016. PMID: 27199406 No abstract available.
The impact of library size and scale of testing on virtual screening.
Liu F, Mailhot O, Glenn IS, Vigneron SF, Bassim V, Xu X, Fonseca-Valencia K, Smith MS, Radchenko DS, Fraser JS, Moroz YS, Irwin JJ, Shoichet BK. Liu F, et al. Among authors: fraser js. Nat Chem Biol. 2025 Jan 3. doi: 10.1038/s41589-024-01797-w. Online ahead of print. Nat Chem Biol. 2025. PMID: 39753705
An ILC2-chitinase circuit restores lung homeostasis after epithelial injury.
Jung H, Kim DH, Díaz RE, White JM, Rucknagel S, Mosby L, Wang Y, Reddy S, Winkler ES, Hassan AO, Ying B, Diamond MS, Locksley RM, Fraser JS, Van Dyken SJ. Jung H, et al. Among authors: fraser js. Sci Immunol. 2024 Oct 18;9(100):eadl2986. doi: 10.1126/sciimmunol.adl2986. Epub 2024 Oct 18. Sci Immunol. 2024. PMID: 39423283
Expanding Automated Multiconformer Ligand Modeling to Macrocycles and Fragments.
Flowers J, Echols N, Correy G, Jaishankar P, Togo T, Renslo AR, van den Bedem H, Fraser JS, Wankowicz SA. Flowers J, et al. Among authors: fraser js. bioRxiv [Preprint]. 2024 Sep 23:2024.09.20.613996. doi: 10.1101/2024.09.20.613996. bioRxiv. 2024. PMID: 39386683 Free PMC article. Preprint.
Extensive exploration of structure activity relationships for the SARS-CoV-2 macrodomain from shape-based fragment merging and active learning.
Correy GJ, Rachman M, Togo T, Gahbauer S, Doruk YU, Stevens M, Jaishankar P, Kelley B, Goldman B, Schmidt M, Kramer T, Ashworth A, Riley P, Shoichet BK, Renslo AR, Walters WP, Fraser JS. Correy GJ, et al. Among authors: fraser js. bioRxiv [Preprint]. 2024 Aug 26:2024.08.25.609621. doi: 10.1101/2024.08.25.609621. bioRxiv. 2024. PMID: 39253507 Free PMC article. Preprint.
AcrIF11 is a potent CRISPR-specific ADP-ribosyltransferase encoded by phage and plasmid.
Chen DF, Roe LT, Li Y, Borges AL, Zhang JY, Babbar P, Maji S, Stevens MGV, Correy GJ, Diolaiti ME, Smith DH, Ashworth A, Stroud RM, Kelly MJS, Bondy-Denomy J, Fraser JS. Chen DF, et al. Among authors: fraser js. bioRxiv [Preprint]. 2024 Aug 26:2024.08.26.609590. doi: 10.1101/2024.08.26.609590. bioRxiv. 2024. PMID: 39253479 Free PMC article. Preprint.
206 results