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AUTO-TUNE: selecting the distance threshold for inferring HIV transmission clusters.
Weaver S, Dávila Conn VM, Ji D, Verdonk H, Ávila-Ríos S, Leigh Brown AJ, Wertheim JO, Kosakovsky Pond SL. Weaver S, et al. Among authors: leigh brown aj. Front Bioinform. 2024 Jul 10;4:1400003. doi: 10.3389/fbinf.2024.1400003. eCollection 2024. Front Bioinform. 2024. PMID: 39086842 Free PMC article.
AUTO-TUNE: SELECTING THE DISTANCE THRESHOLD FOR INFERRING HIV TRANSMISSION CLUSTERS.
Weaver S, Dávila-Conn V, Ji D, Verdonk H, Ávila-Ríos S, Leigh Brown AJ, Wertheim JO, Kosakovsky Pond SL. Weaver S, et al. Among authors: leigh brown aj. bioRxiv [Preprint]. 2024 Mar 14:2024.03.11.584522. doi: 10.1101/2024.03.11.584522. bioRxiv. 2024. Update in: Front Bioinform. 2024 Jul 10;4:1400003. doi: 10.3389/fbinf.2024.1400003 PMID: 38559140 Free PMC article. Updated. Preprint.
Detection of HIV-1 Transmission Clusters from Dried Blood Spots within a Universal Test-and-Treat Trial in East Africa.
Pujol-Hodge E, Salazar-Gonzalez JF, Ssemwanga D, Charlebois ED, Ayieko J, Grant HE, Liegler T, Atkins KE, Kaleebu P, Kamya MR, Petersen M, Havlir DV, Leigh Brown AJ. Pujol-Hodge E, et al. Among authors: leigh brown aj. Viruses. 2022 Jul 29;14(8):1673. doi: 10.3390/v14081673. Viruses. 2022. PMID: 36016295 Free PMC article. Clinical Trial.
Pervasive and non-random recombination in near full-length HIV genomes from Uganda.
Grant HE, Hodcroft EB, Ssemwanga D, Kitayimbwa JM, Yebra G, Esquivel Gomez LR, Frampton D, Gall A, Kellam P, de Oliveira T, Bbosa N, Nsubuga RN, Kibengo F, Kwan TH, Lycett S, Kao R, Robertson DL, Ratmann O, Fraser C, Pillay D, Kaleebu P, Leigh Brown AJ. Grant HE, et al. Among authors: leigh brown aj. Virus Evol. 2020 Feb 11;6(1):veaa004. doi: 10.1093/ve/veaa004. eCollection 2020 Jan. Virus Evol. 2020. PMID: 32395255 Free PMC article.
A high HIV-1 strain variability in London, UK, revealed by full-genome analysis: Results from the ICONIC project.
Yebra G, Frampton D, Gallo Cassarino T, Raffle J, Hubb J, Ferns RB, Waters L, Tong CYW, Kozlakidis Z, Hayward A, Kellam P, Pillay D, Clark D, Nastouli E, Leigh Brown AJ; ICONIC Consortium. Yebra G, et al. Among authors: leigh brown aj. PLoS One. 2018 Feb 1;13(2):e0192081. doi: 10.1371/journal.pone.0192081. eCollection 2018. PLoS One. 2018. PMID: 29389981 Free PMC article.
57 results