Štefl R - Search Results

1

Structural and functional characterization of the interaction between the influenza A virus RNA polymerase and the CTD of host RNA polymerase II.

Keown J, Baazaoui A, Šebesta M, Štefl R, Carrique L, Fodor E, Grimes JM. Keown J, et al. Among authors: stefl r. J Virol. 2024 May 14;98(5):e0013824. doi: 10.1128/jvi.00138-24. Epub 2024 Apr 2. J Virol. 2024. PMID: 38563748 Free PMC article.

2

The exosome and RNA quality control in the nucleus.

Vanacova S, Stefl R. Vanacova S, et al. Among authors: stefl r. EMBO Rep. 2007 Jul;8(7):651-7. doi: 10.1038/sj.embor.7401005. EMBO Rep. 2007. PMID: 17603538 Free PMC article. Review.

3

RNA sequence- and shape-dependent recognition by proteins in the ribonucleoprotein particle.

Stefl R, Skrisovska L, Allain FH. Stefl R, et al. EMBO Rep. 2005 Jan;6(1):33-8. doi: 10.1038/sj.embor.7400325. EMBO Rep. 2005. PMID: 15643449 Free PMC article. Review.

4

Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs.

Stefl R, Xu M, Skrisovska L, Emeson RB, Allain FH. Stefl R, et al. Structure. 2006 Feb;14(2):345-55. doi: 10.1016/j.str.2005.11.013. Structure. 2006. PMID: 16472753 Free article.

5

An A-type double helix of DNA having B-type puckering of the deoxyribose rings.

Trantírek L, Stefl R, Vorlícková M, Koca J, Sklenár V, Kypr J. Trantírek L, et al. Among authors: stefl r. J Mol Biol. 2000 Apr 7;297(4):907-22. doi: 10.1006/jmbi.2000.3592. J Mol Biol. 2000. PMID: 10736226

6

Can We Execute Stable Microsecond-Scale Atomistic Simulations of Protein-RNA Complexes?

Krepl M, Havrila M, Stadlbauer P, Banas P, Otyepka M, Pasulka J, Stefl R, Sponer J. Krepl M, et al. Among authors: stefl r. J Chem Theory Comput. 2015 Mar 10;11(3):1220-43. doi: 10.1021/ct5008108. Epub 2015 Feb 3. J Chem Theory Comput. 2015. PMID: 26579770

7

Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.

Oberstrass FC, Lee A, Stefl R, Janis M, Chanfreau G, Allain FH. Oberstrass FC, et al. Among authors: stefl r. Nat Struct Mol Biol. 2006 Feb;13(2):160-7. doi: 10.1038/nsmb1038. Epub 2006 Jan 22. Nat Struct Mol Biol. 2006. PMID: 16429156

8

A-like guanine-guanine stacking in the aqueous DNA duplex of d(GGGGCCCC).

Stefl R, Trantírek L, Vorlícková M, Koca J, Sklenár V, Kypr J. Stefl R, et al. J Mol Biol. 2001 Mar 23;307(2):513-24. doi: 10.1006/jmbi.2001.4484. J Mol Biol. 2001. PMID: 11254379

9

In vivo SELEX reveals novel sequence and structural determinants of Nrd1-Nab3-Sen1-dependent transcription termination.

Porrua O, Hobor F, Boulay J, Kubicek K, D'Aubenton-Carafa Y, Gudipati RK, Stefl R, Libri D. Porrua O, et al. Among authors: stefl r. EMBO J. 2012 Oct 3;31(19):3935-48. doi: 10.1038/emboj.2012.237. Epub 2012 Aug 28. EMBO J. 2012. PMID: 23032188 Free PMC article.

10

The CTD code of RNA polymerase II: a structural view.

Jasnovidova O, Stefl R. Jasnovidova O, et al. Among authors: stefl r. Wiley Interdiscip Rev RNA. 2013 Jan-Feb;4(1):1-16. doi: 10.1002/wrna.1138. Epub 2012 Oct 5. Wiley Interdiscip Rev RNA. 2013. PMID: 23042580 Review.

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