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Page 1
An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution.
Subissi L, Otieno JR, Worp N, Attar Cohen H, Oude Munnink BB, Abu-Raddad LJ, Alm E, Barakat A, Barclay WS, Bhiman JN, Caly L, Chand M, Chen M, Cullinane A, de Oliveira T, Drosten C, Druce J, Effler P, El Masry I, Faye A, Ghedin E, Grant R, Haagmans BL, Happi C, Herring BL, Hodcroft EB, Ikejezie J, Katawera V, Kassamali ZA, Leo YS, Leung GM, Kondor RJ, Marklewitz M, Mendez-Rico J, Melhem NM, Munster V, Nahapetyan K, Naindoo D, Oh DY, Peacock TP, Peiris M, Peng Z, Poon LLM, Rambaut A, Saha S, Shen Y, Siqueira MM, Volz E, Tessema SK, Thiel V, Triki H, van der Werf S, von Eije K, Cunningham J, Koopmans MPG, von Gottberg A, Agrawal A, Van Kerkhove MD. Subissi L, et al. Among authors: van kerkhove md. Nat Med. 2024 Sep;30(9):2400-2403. doi: 10.1038/s41591-024-02949-0. Nat Med. 2024. PMID: 38720002 No abstract available.
Global disparities in SARS-CoV-2 genomic surveillance.
Brito AF, Semenova E, Dudas G, Hassler GW, Kalinich CC, Kraemer MUG, Ho J, Tegally H, Githinji G, Agoti CN, Matkin LE, Whittaker C; Danish Covid-19 Genome Consortium; COVID-19 Impact Project; Network for Genomic Surveillance in South Africa (NGS-SA); GISAID core curation team; Howden BP, Sintchenko V, Zuckerman NS, Mor O, Blankenship HM, de Oliveira T, Lin RTP, Siqueira MM, Resende PC, Vasconcelos ATR, Spilki FR, Aguiar RS, Alexiev I, Ivanov IN, Philipova I, Carrington CVF, Sahadeo NSD, Gurry C, Maurer-Stroh S, Naidoo D, von Eije KJ, Perkins MD, van Kerkhove M, Hill SC, Sabino EC, Pybus OG, Dye C, Bhatt S, Flaxman S, Suchard MA, Grubaugh ND, Baele G, Faria NR. Brito AF, et al. Among authors: van kerkhove m. medRxiv [Preprint]. 2021 Dec 9:2021.08.21.21262393. doi: 10.1101/2021.08.21.21262393. medRxiv. 2021. Update in: Nat Commun. 2022 Nov 16;13(1):7003. doi: 10.1038/s41467-022-33713-y PMID: 34462754 Free PMC article. Updated. Preprint.
SARS-CoV-2 diagnostic testing rates determine the sensitivity of genomic surveillance programs.
Han AX, Toporowski A, Sacks JA, Perkins MD, Briand S, van Kerkhove M, Hannay E, Carmona S, Rodriguez B, Parker E, Nichols BE, Russell CA. Han AX, et al. Among authors: van kerkhove m. medRxiv [Preprint]. 2022 Sep 16:2022.05.20.22275319. doi: 10.1101/2022.05.20.22275319. medRxiv. 2022. Update in: Nat Genet. 2023 Jan;55(1):26-33. doi: 10.1038/s41588-022-01267-w PMID: 35664998 Free PMC article. Updated. Preprint.
Global genomic surveillance of monkeypox virus.
Otieno JR, Ruis C, Onoja AB, Kuppalli K, Hoxha A, Nitsche A, Brinkmann A, Michel J, Mbala-Kingebeni P, Mukadi-Bamuleka D, Osman MM, Hussein H, Raja MA, Fotsing R, Herring BL, Keita M, Rico JM, Gresh L, Barakat A, Katawera V, Nahapetyan K, Naidoo D, Floto RA, Cunningham J, Van Kerkhove MD, Lewis RF, Subissi L. Otieno JR, et al. Among authors: van kerkhove md. Nat Med. 2024 Oct 23. doi: 10.1038/s41591-024-03370-3. Online ahead of print. Nat Med. 2024. PMID: 39442559
Informing the pandemic response: the role of the WHO's COVID-19 Weekly Epidemiological Update.
Ikejezie J, Miglietta A, Hammermeister Nezu I, Adele S, Higdon MM, Feikin D, Lata H, Mesfin S, Idoko F, Shimizu K, Acma A, Moro S, Attar Cohen H, Sinnathamby MA, Otieno JR, Temre Y, Ajong BN, Mirembe BB, Guinko TN, Sodagar V, Schultz C, Muianga J, De Barros S, Escobar Corado Waeber AR, Jin Y, Rico Chinchilla A, Izawa Y, Khare S, Poole M, Alexander N, Ciobanu S, Dorji T, Hassan M, Kato M, Matsui T, Ogundiran O, Pebody RG, Phengxay M, Riviere-Cinnamond A, Greene-Cramer BJ, Peron E, Archer BN, Subissi L, Kassamali ZA, Awofisayo-Okuyelu A, le Polain de Waroux O, Hamblion E, Pavlin BI, Morgan O, Fall IS, Van Kerkhove MD, Mahamud A. Ikejezie J, et al. Among authors: van kerkhove md. BMJ Glob Health. 2024 Apr 4;9(4):e014466. doi: 10.1136/bmjgh-2023-014466. BMJ Glob Health. 2024. PMID: 38580376 Free PMC article.
WHO's Investigations and Studies, Unity Studies: A global initiative creating equitable opportunities for enhanced surveillance, operational research, capacity building, and global knowledge sharing.
Bergeri I, Boddington NL, Lewis HC, Subissi L, von Dobschuetz S, Rodriguez A, Jara J, El Naja HA, Barakat A, Rashidian A, Aly EA, Al Ariqi L, Wijesinghe P, Inbanathan F, Nguyen PN, Phengxay M, Le LV, Enebish T, Okeibunor J, Herring B, Farley E, Jorgensen P, Vaughan AM, Mott J, Zhang W, Pebody R, Van Kerkhove MD. Bergeri I, et al. Among authors: van kerkhove md. Influenza Other Respir Viruses. 2024 Feb;18(2):e13256. doi: 10.1111/irv.13256. Influenza Other Respir Viruses. 2024. PMID: 38346794 Free PMC article.
Surveillance for variants of SARS-CoV-2 to inform risk assessments.
Attar Cohen H, Mesfin S, Ikejezie J, Kassamali Z, Campbell F, Adele S, Guinko N, Idoko F, Mirembe BB, Mitri ME, Nezu I, Shimizu K, Ngongheh AB, Sklenovska N, Gumede N, Mosha FS, Mohamed B, Corpuz A, Pebody R, Marklewitz M, Gresh L, Mendez Rico JA, Hundal K, Kato M, Babu A, Archer BN, le Polain de Waroux O, Van Kerkhove MD, Mahamud A, Subissi L, Pavlin BI. Attar Cohen H, et al. Among authors: van kerkhove md. Bull World Health Organ. 2023 Nov 1;101(11):707-716. doi: 10.2471/BLT.23.290093. Epub 2023 Sep 28. Bull World Health Organ. 2023. PMID: 37961054 Free PMC article.
Towards the development of a SARS-CoV-2 variant risk assessment tool: expert consultation on the assessment of scientific evidence on emerging variants.
Worp N, Subissi L, Perkins MD, Van Kerkhove MD, Agrawal A, Chand M, van Beek J, Oude Munnink BB, Koopmans MPG. Worp N, et al. Among authors: van kerkhove md. Lancet Microbe. 2023 Oct;4(10):e830-e836. doi: 10.1016/S2666-5247(23)00179-9. Epub 2023 Aug 25. Lancet Microbe. 2023. PMID: 37640039 Free article. Review.
WHO Global Situational Alert System: a mixed methods multistage approach to identify country-level COVID-19 alerts.
McMenamin M, Kolmer J, Djordjevic I, Campbell F, Laurenson-Schafer H, Abbate JL, Abdelgawad BM, Babu A, Balde T, Batra N, Bélorgeot VD, Brindle H, Dorji T, Esmail M, Hammermeister Nezu I, Hernández-García L, Hassan M, Idoko F, Karmin S, Kassamali ZA, Kato M, Matsui T, Duan M, Motaze V, Ogundiran O, Pavlin BI, Riviere-Cinnamond A, Ryan K, Schmidt T, Sedai T, Van Kerkhove MD, Zakaria T, Höhle M, Mahamud AR, le Polain de Waroux O; WHO Global Situational Alert System Group. McMenamin M, et al. Among authors: van kerkhove md. BMJ Glob Health. 2023 Jul;8(7):e012241. doi: 10.1136/bmjgh-2023-012241. BMJ Glob Health. 2023. PMID: 37495371 Free PMC article.
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