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A diverse proteome is present and enzymatically active in metabolite extracts.
House RRJ, Soper-Hopper MT, Vincent MP, Ellis AE, Capan CD, Madaj ZB, Wolfrum E, Isaguirre CN, Castello CD, Johnson AB, Escobar Galvis ML, Williams KS, Lee H, Sheldon RD. House RRJ, et al. Among authors: sheldon rd. Nat Commun. 2024 Jul 10;15(1):5796. doi: 10.1038/s41467-024-50128-z. Nat Commun. 2024. PMID: 38987243 Free PMC article.
Prior metabolite extraction fully preserves RNAseq quality and enables integrative multi-'omics analysis of the liver metabolic response to viral infection.
Madaj ZB, Dahabieh MS, Kamalumpundi V, Muhire B, Pettinga J, Siwicki RA, Ellis AE, Isaguirre C, Escobar Galvis ML, DeCamp L, Jones RG, Givan SA, Adams M, Sheldon RD. Madaj ZB, et al. Among authors: sheldon rd. RNA Biol. 2023 Jan;20(1):186-197. doi: 10.1080/15476286.2023.2204586. RNA Biol. 2023. PMID: 37095747 Free PMC article.
Itaconate confers tolerance to late NLRP3 inflammasome activation.
Bambouskova M, Potuckova L, Paulenda T, Kerndl M, Mogilenko DA, Lizotte K, Swain A, Hayes S, Sheldon RD, Kim H, Kapadnis U, Ellis AE, Isaguirre C, Burdess S, Laha A, Amarasinghe GK, Chubukov V, Roddy TP, Diamond MS, Jones RG, Simons DM, Artyomov MN. Bambouskova M, et al. Among authors: sheldon rd. Cell Rep. 2021 Mar 9;34(10):108756. doi: 10.1016/j.celrep.2021.108756. Cell Rep. 2021. PMID: 33691097 Free PMC article.
13C metabolite tracing reveals glutamine and acetate as critical in vivo fuels for CD8 T cells.
Ma EH, Dahabieh MS, DeCamp LM, Kaymak I, Kitchen-Goosen SM, Oswald BM, Longo J, Roy DG, Verway MJ, Johnson RM, Samborska B, Duimstra LR, Scullion CA, Steadman M, Vos M, Roddy TP, Krawczyk CM, Williams KS, Sheldon RD, Jones RG. Ma EH, et al. Among authors: sheldon rd. Sci Adv. 2024 May 31;10(22):eadj1431. doi: 10.1126/sciadv.adj1431. Epub 2024 May 29. Sci Adv. 2024. PMID: 38809979 Free PMC article.
ACLY and ACSS2 link nutrient-dependent chromatin accessibility to CD8 T cell effector responses.
Kaymak I, Watson MJ, Oswald BM, Ma S, Johnson BK, DeCamp LM, Mabvakure BM, Luda KM, Ma EH, Lau K, Fu Z, Muhire B, Kitchen-Goosen SM, Vander Ark A, Dahabieh MS, Samborska B, Vos M, Shen H, Fan ZP, Roddy TP, Kingsbury GA, Sousa CM, Krawczyk CM, Williams KS, Sheldon RD, Kaech SM, Roy DG, Jones RG. Kaymak I, et al. Among authors: sheldon rd. J Exp Med. 2024 Sep 2;221(9):e20231820. doi: 10.1084/jem.20231820. Epub 2024 Aug 16. J Exp Med. 2024. PMID: 39150482
Nutrient-driven histone code determines exhausted CD8+ T cell fates.
Ma S, Dahabieh MS, Mann TH, Zhao S, McDonald B, Song WS, Chung HK, Farsakoglu Y, Garcia-Rivera L, Hoffmann FA, Xu S, Du VY, Chen D, Furgiuele J, LaPorta M, Jacobs E, DeCamp LM, Oswald BM, Sheldon RD, Ellis AE, Liu L, He P, Wang Y, Jang C, Jones RG, Kaech SM. Ma S, et al. Among authors: sheldon rd. Science. 2024 Dec 12:eadj3020. doi: 10.1126/science.adj3020. Online ahead of print. Science. 2024. PMID: 39666821
Dietary Restriction Enhances CD8+ T Cell Ketolysis to Limit Exhaustion and Boost Anti-Tumor Immunity.
Oswald BM, DeCamp LM, Longo J, Dahabieh MS, Bunda N, Ma S, Watson MJ, Sheldon RD, Vincent MP, Johnson BK, Ellis AE, Soper-Hopper MT, Isaguirre CN, Shen H, Williams KS, Crawford PA, Kaech S, Jang HJ, Krawczyk CM, Jones RG. Oswald BM, et al. Among authors: sheldon rd. bioRxiv [Preprint]. 2024 Nov 15:2024.11.14.621733. doi: 10.1101/2024.11.14.621733. bioRxiv. 2024. PMID: 39605550 Free PMC article. Preprint.
58 results