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A high-resolution map of functional miR-181 response elements in the thymus reveals the role of coding sequence targeting and an alternative seed match.
Verheyden NA, Klostermann M, Brüggemann M, Steede HM, Scholz A, Amr S, Lichtenthaeler C, Münch C, Schmid T, Zarnack K, Krueger A. Verheyden NA, et al. Among authors: zarnack k. Nucleic Acids Res. 2024 Aug 12;52(14):8515-8533. doi: 10.1093/nar/gkae416. Nucleic Acids Res. 2024. PMID: 38783381 Free PMC article.
iCLIP predicts the dual splicing effects of TIA-RNA interactions.
Wang Z, Kayikci M, Briese M, Zarnack K, Luscombe NM, Rot G, Zupan B, Curk T, Ule J. Wang Z, et al. Among authors: zarnack k. PLoS Biol. 2010 Oct 26;8(10):e1000530. doi: 10.1371/journal.pbio.1000530. PLoS Biol. 2010. PMID: 21048981 Free PMC article.
mRNA trafficking in fungi.
Zarnack K, Feldbrügge M. Zarnack K, et al. Mol Genet Genomics. 2007 Oct;278(4):347-59. doi: 10.1007/s00438-007-0271-8. Epub 2007 Sep 1. Mol Genet Genomics. 2007. PMID: 17768642 Review.
Microtubule-dependent mRNA transport in fungi.
Zarnack K, Feldbrügge M. Zarnack K, et al. Eukaryot Cell. 2010 Jul;9(7):982-90. doi: 10.1128/EC.00030-10. Epub 2010 May 14. Eukaryot Cell. 2010. PMID: 20472693 Free PMC article. Review.
An atlas of RNA-dependent proteins in cell division reveals the riboregulation of mitotic protein-protein interactions.
Rajagopal V, Seiler J, Nasa I, Cantarella S, Theiss J, Herget F, Kaifer B, Schneider M, Helm D, König J, Zarnack K, Diederichs S, Kettenbach AN, Caudron-Herger M. Rajagopal V, et al. Among authors: zarnack k. bioRxiv [Preprint]. 2024 Sep 26:2024.09.25.614981. doi: 10.1101/2024.09.25.614981. bioRxiv. 2024. PMID: 39386702 Free PMC article. Preprint.
High-throughput approaches in RNA biology.
König J, Zarnack K. König J, et al. Among authors: zarnack k. Methods. 2020 Jun 1;178:1-2. doi: 10.1016/j.ymeth.2020.04.002. Epub 2020 Apr 8. Methods. 2020. PMID: 32278015 No abstract available.
The posttranscriptional machinery of Ustilago maydis.
Feldbrügge M, Zarnack K, Vollmeister E, Baumann S, Koepke J, König J, Münsterkötter M, Mannhaupt G. Feldbrügge M, et al. Among authors: zarnack k. Fungal Genet Biol. 2008 Aug;45 Suppl 1:S40-6. doi: 10.1016/j.fgb.2008.03.013. Epub 2008 Mar 31. Fungal Genet Biol. 2008. PMID: 18468465 Review.
79 results