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YaHS: yet another Hi-C scaffolding tool.
Zhou C, McCarthy SA, Durbin R. Zhou C, et al. Among authors: durbin r. Bioinformatics. 2023 Jan 1;39(1):btac808. doi: 10.1093/bioinformatics/btac808. Bioinformatics. 2023. PMID: 36525368 Free PMC article.
MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads.
Uliano-Silva M, Ferreira JGRN, Krasheninnikova K; Darwin Tree of Life Consortium; Formenti G, Abueg L, Torrance J, Myers EW, Durbin R, Blaxter M, McCarthy SA. Uliano-Silva M, et al. Among authors: durbin r. BMC Bioinformatics. 2023 Jul 18;24(1):288. doi: 10.1186/s12859-023-05385-y. BMC Bioinformatics. 2023. PMID: 37464285 Free PMC article.
First chromosome scale genomes of ithomiine butterflies (Nymphalidae: Ithomiini): Comparative models for mimicry genetic studies.
Gauthier J, Meier J, Legeai F, McClure M, Whibley A, Bretaudeau A, Boulain H, Parrinello H, Mugford ST, Durbin R, Zhou C, McCarthy S, Wheat CW, Piron-Prunier F, Monsempes C, François MC, Jay P, Noûs C, Persyn E, Jacquin-Joly E, Meslin C, Montagné N, Lemaitre C, Elias M. Gauthier J, et al. Among authors: durbin r. Mol Ecol Resour. 2023 May;23(4):872-885. doi: 10.1111/1755-0998.13749. Epub 2023 Jan 27. Mol Ecol Resour. 2023. PMID: 36533297 Free article.
Genomic evidence reveals three W-autosome fusions in Heliconius butterflies.
Rueda-M N, Pardo-Diaz C, Montejo-Kovacevich G, McMillan WO, Kozak KM, Arias CF, Ready J, McCarthy S, Durbin R, Jiggins CD, Meier JI, Salazar C. Rueda-M N, et al. Among authors: durbin r. PLoS Genet. 2024 Jul 18;20(7):e1011318. doi: 10.1371/journal.pgen.1011318. eCollection 2024 Jul. PLoS Genet. 2024. PMID: 39024186 Free PMC article.
Insights into non-crossover recombination from long-read sperm sequencing.
Schweiger R, Lee S, Zhou C, Yang TP, Smith K, Li S, Sanghvi R, Neville M, Mitchell E, Nessa A, Wadge S, Small KS, Campbell PJ, Sudmant PH, Rahbari R, Durbin R. Schweiger R, et al. Among authors: durbin r. bioRxiv [Preprint]. 2024 Jul 7:2024.07.05.602249. doi: 10.1101/2024.07.05.602249. bioRxiv. 2024. PMID: 39005338 Free PMC article. Preprint.
518 results