Ferreira P - Search Results

1

Revisiting the reaction pathways for phospholipid hydrolysis catalyzed by phospholipase A2 with QM/MM methods.

Pinto AV, Ferreira P, Cunha AV, Havenith RWA, Magalhães AL, Ramos MJ, Fernandes PA. Pinto AV, et al. Among authors: ferreira p. Chem Sci. 2024 May 22;15(25):9793-9805. doi: 10.1039/d4sc02315c. eCollection 2024 Jun 26. Chem Sci. 2024. PMID: 38939148 Free PMC article.

2

Parametrization of Molybdenum Cofactors for the AMBER Force Field.

Ferreira P, Cerqueira NMFSA, Brás NF, Fernandes PA, Ramos MJ. Ferreira P, et al. J Chem Theory Comput. 2018 May 8;14(5):2538-2548. doi: 10.1021/acs.jctc.8b00137. Epub 2018 Apr 16. J Chem Theory Comput. 2018. PMID: 29630831

3

New insights about the monomer and homodimer structures of the human AOX1.

Ferreira P, Cerqueira NMFSA, Coelho C, Fernandes PA, Romão MJ, Ramos MJ. Ferreira P, et al. Phys Chem Chem Phys. 2019 Jul 7;21(25):13545-13554. doi: 10.1039/c9cp01040h. Epub 2019 Jun 7. Phys Chem Chem Phys. 2019. PMID: 31172995

4

Animal Fatty Acid Synthase: A Chemical Nanofactory.

Paiva P, Medina FE, Viegas M, Ferreira P, Neves RPP, Sousa JPM, Ramos MJ, Fernandes PA. Paiva P, et al. Among authors: ferreira p. Chem Rev. 2021 Aug 11;121(15):9502-9553. doi: 10.1021/acs.chemrev.1c00147. Epub 2021 Jun 22. Chem Rev. 2021. PMID: 34156235 Review.

5

The Catalytic Mechanism of the Retaining Glycosyltransferase Mannosylglycerate Synthase.

Ferreira P, Fernandes PA, Ramos MJ. Ferreira P, et al. Chemistry. 2021 Oct 7;27(56):13998-14006. doi: 10.1002/chem.202101724. Epub 2021 Sep 8. Chemistry. 2021. PMID: 34355437

6

Development of Nanoscale Graphene Oxide Models for the Adsorption of Biological Molecules.

Pinto AV, Ferreira P, Fernandes PA, Magalhães AL, Ramos MJ. Pinto AV, et al. Among authors: ferreira p. J Phys Chem B. 2023 Jan 19;127(2):557-566. doi: 10.1021/acs.jpcb.2c06037. Epub 2022 Oct 25. J Phys Chem B. 2023. PMID: 36282235

7

DszA Catalyzes C-S Bond Cleavage through N⁵-Hydroperoxyl Formation.

Ferreira P, Neves RPP, Miranda FP, Cunha AV, Havenith RWA, Ramos MJ, Fernandes PA. Ferreira P, et al. J Chem Inf Model. 2024 May 27;64(10):4218-4230. doi: 10.1021/acs.jcim.4c00301. Epub 2024 Apr 29. J Chem Inf Model. 2024. PMID: 38684937 Free PMC article.

8

Improving the Catalytic Power of the DszD Enzyme for the Biodesulfurization of Crude Oil and Derivatives.

Ferreira P, Sousa SF, Fernandes PA, Ramos MJ. Ferreira P, et al. Chemistry. 2017 Dec 6;23(68):17231-17241. doi: 10.1002/chem.201704057. Epub 2017 Nov 22. Chemistry. 2017. PMID: 28976031

9

The Catalytic Mechanism of the Marine-Derived Macrocyclase PatGmac.

Brás NF, Ferreira P, Calixto AR, Jaspars M, Houssen W, Naismith JH, Fernandes PA, Ramos MJ. Brás NF, et al. Among authors: ferreira p. Chemistry. 2016 Sep 5;22(37):13089-97. doi: 10.1002/chem.201601670. Epub 2016 Jul 8. Chemistry. 2016. PMID: 27389424 Free PMC article.

10

Mining and engineering activity in catalytic amyloids.

Peña-Díaz S, Ferreira P, Ramos MJ, Otzen DE. Peña-Díaz S, et al. Among authors: ferreira p. Methods Enzymol. 2024;697:345-422. doi: 10.1016/bs.mie.2024.03.002. Epub 2024 Apr 20. Methods Enzymol. 2024. PMID: 38816129

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