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Author Correction: LINE-1 transcription activates long-range gene expression.
Li X, Bie L, Wang Y, Hong Y, Zhou Z, Fan Y, Yan X, Tao Y, Huang C, Zhang Y, Sun X, Li JXH, Zhang J, Chang Z, Xi Q, Meng A, Shen X, Xie W, Liu N. Li X, et al. Among authors: shen x. Nat Genet. 2024 Aug;56(8):1762. doi: 10.1038/s41588-024-01866-9. Nat Genet. 2024. PMID: 38982294 No abstract available.
Homotypic clustering of L1 and B1/Alu repeats compartmentalizes the 3D genome.
Lu JY, Chang L, Li T, Wang T, Yin Y, Zhan G, Han X, Zhang K, Tao Y, Percharde M, Wang L, Peng Q, Yan P, Zhang H, Bi X, Shao W, Hong Y, Wu Z, Ma R, Wang P, Li W, Zhang J, Chang Z, Hou Y, Zhu B, Ramalho-Santos M, Li P, Xie W, Na J, Sun Y, Shen X. Lu JY, et al. Among authors: shen x. Cell Res. 2021 Jun;31(6):613-630. doi: 10.1038/s41422-020-00466-6. Epub 2021 Jan 29. Cell Res. 2021. PMID: 33514913 Free PMC article.
LINE-1 transcription activates long-range gene expression.
Li X, Bie L, Wang Y, Hong Y, Zhou Z, Fan Y, Yan X, Tao Y, Huang C, Zhang Y, Sun X, Li JXH, Zhang J, Chang Z, Xi Q, Meng A, Shen X, Xie W, Liu N. Li X, et al. Among authors: shen x. Nat Genet. 2024 Jul;56(7):1494-1502. doi: 10.1038/s41588-024-01789-5. Epub 2024 Jun 7. Nat Genet. 2024. PMID: 38849613
RNA-dependent chromatin targeting of TET2 for endogenous retrovirus control in pluripotent stem cells.
Guallar D, Bi X, Pardavila JA, Huang X, Saenz C, Shi X, Zhou H, Faiola F, Ding J, Haruehanroengra P, Yang F, Li D, Sanchez-Priego C, Saunders A, Pan F, Valdes VJ, Kelley K, Blanco MG, Chen L, Wang H, Sheng J, Xu M, Fidalgo M, Shen X, Wang J. Guallar D, et al. Among authors: shen x. Nat Genet. 2018 Mar;50(3):443-451. doi: 10.1038/s41588-018-0060-9. Epub 2018 Feb 26. Nat Genet. 2018. PMID: 29483655 Free PMC article.
U1 snRNP regulates chromatin retention of noncoding RNAs.
Yin Y, Lu JY, Zhang X, Shao W, Xu Y, Li P, Hong Y, Cui L, Shan G, Tian B, Zhang QC, Shen X. Yin Y, et al. Among authors: shen x. Nature. 2020 Apr;580(7801):147-150. doi: 10.1038/s41586-020-2105-3. Epub 2020 Mar 11. Nature. 2020. PMID: 32238924
Phase separation of RNA-binding protein promotes polymerase binding and transcription.
Shao W, Bi X, Pan Y, Gao B, Wu J, Yin Y, Liu Z, Peng M, Zhang W, Jiang X, Ren W, Xu Y, Wu Z, Wang K, Zhan G, Lu JY, Han X, Li T, Wang J, Li G, Deng H, Li B, Shen X. Shao W, et al. Among authors: shen x. Nat Chem Biol. 2022 Jan;18(1):70-80. doi: 10.1038/s41589-021-00904-5. Epub 2021 Dec 16. Nat Chem Biol. 2022. PMID: 34916619
Nuclear RNA homeostasis promotes systems-level coordination of cell fate and senescence.
Han X, Xing L, Hong Y, Zhang X, Hao B, Lu JY, Huang M, Wang Z, Ma S, Zhan G, Li T, Hao X, Tao Y, Li G, Zhou S, Zheng Z, Shao W, Zeng Y, Ma D, Zhang W, Xie Z, Deng H, Yan J, Deng W, Shen X. Han X, et al. Among authors: shen x. Cell Stem Cell. 2024 May 2;31(5):694-716.e11. doi: 10.1016/j.stem.2024.03.015. Epub 2024 Apr 16. Cell Stem Cell. 2024. PMID: 38631356
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