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Coupling Microdroplet-Based Sample Preparation, Multiplexed Isobaric Labeling, and Nanoflow Peptide Fractionation for Deep Proteome Profiling of the Tissue Microenvironment.
Veličković M, Fillmore TL, Attah IK, Posso C, Pino JC, Zhao R, Williams SM, Veličković D, Jacobs JM, Burnum-Johnson KE, Zhu Y, Piehowski PD. Veličković M, et al. Among authors: burnum johnson ke. Anal Chem. 2024 Aug 13;96(32):12973-12982. doi: 10.1021/acs.analchem.4c00523. Epub 2024 Aug 1. Anal Chem. 2024. PMID: 39089681 Free PMC article.
PeakQC: A Software Tool for Omics-Agnostic Automated Quality Control of Mass Spectrometry Data.
Harrison A, Eder JG, Lalli PM, Munoz N, Gao Y, Clendinen CS, Orton DJ, Zheng X, Williams SM, Couvillion SP, Chu RK, Balasubramanian VK, Bhattacharjee A, Anderton CR, Pomraning KR, Burnum-Johnson KE, Liu T, Kyle JE, Bilbao A. Harrison A, et al. Among authors: burnum johnson ke. J Am Soc Mass Spectrom. 2024 Jul 16. doi: 10.1021/jasms.4c00146. Online ahead of print. J Am Soc Mass Spectrom. 2024. PMID: 39013167
A compendium of multi-omics data illuminating host responses to lethal human virus infections.
Eisfeld AJ, Anderson LN, Fan S, Walters KB, Halfmann PJ, Westhoff Smith D, Thackray LB, Tan Q, Sims AC, Menachery VD, Schäfer A, Sheahan TP, Cockrell AS, Stratton KG, Webb-Robertson BM, Kyle JE, Burnum-Johnson KE, Kim YM, Nicora CD, Peralta Z, N'jai AU, Sahr F, van Bakel H, Diamond MS, Baric RS, Metz TO, Smith RD, Kawaoka Y, Waters KM. Eisfeld AJ, et al. Among authors: burnum johnson ke. Sci Data. 2024 Apr 2;11(1):328. doi: 10.1038/s41597-024-03124-3. Sci Data. 2024. PMID: 38565538 Free PMC article.
Mapping microhabitats of lignocellulose decomposition by a microbial consortium.
Veličković M, Wu R, Gao Y, Thairu MW, Veličković D, Munoz N, Clendinen CS, Bilbao A, Chu RK, Lalli PM, Zemaitis K, Nicora CD, Kyle JE, Orton D, Williams S, Zhu Y, Zhao R, Monroe ME, Moore RJ, Webb-Robertson BM, Bramer LM, Currie CR, Piehowski PD, Burnum-Johnson KE. Veličković M, et al. Among authors: burnum johnson ke. Nat Chem Biol. 2024 Aug;20(8):1033-1043. doi: 10.1038/s41589-023-01536-7. Epub 2024 Feb 1. Nat Chem Biol. 2024. PMID: 38302607 Free PMC article.
A fast and sensitive size-exclusion chromatography method for plasma extracellular vesicle proteomic analysis.
Ludovico ID, Powell SM, Many G, Bramer L, Sarkar S, Stratton K, Liu T, Shi T, Qian WJ, Burnum-Johnson KE, Melchior JT, Nakayasu ES. Ludovico ID, et al. Among authors: burnum johnson ke. bioRxiv [Preprint]. 2024 Jan 20:2024.01.17.576135. doi: 10.1101/2024.01.17.576135. bioRxiv. 2024. Update in: Proteomics. 2024 Aug;24(16):e2400025. doi: 10.1002/pmic.202400025. PMID: 38293231 Free PMC article. Updated. Preprint.
Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions.
Odenkirk MT, Zheng X, Kyle JE, Stratton KG, Nicora CD, Bloodsworth KJ, Mclean CA, Masters CL, Monroe ME, Doecke JD, Smith RD, Burnum-Johnson KE, Roberts BR, Baker ES. Odenkirk MT, et al. Among authors: burnum johnson ke. J Proteome Res. 2024 Aug 2;23(8):2970-2985. doi: 10.1021/acs.jproteome.3c00604. Epub 2024 Jan 18. J Proteome Res. 2024. PMID: 38236019 Free PMC article.
73 results