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Page 1
CellKine clinical trial: first report from a phase 1 trial of allogeneic bone marrow-derived mesenchymal stem cells in subjects with painful lumbar facet joint arthropathy.
Yan D, Zubair AC, Osborne MD, Pagan-Rosado R, Stone JA, Lehman VT, Durand NC, Kubrova E, Wang Z, Witter DM, Baer MM, Ponce GC, Quiñones-Hinojosa A, Qu W. Yan D, et al. Among authors: durand nc. Pain Rep. 2024 Sep 18;9(5):e1181. doi: 10.1097/PR9.0000000000001181. eCollection 2024 Oct. Pain Rep. 2024. PMID: 39300992 Free PMC article.
Cohesin-mediated 3D contacts tune enhancer-promoter regulation.
Guckelberger P, Doughty BR, Munson G, Rao SSP, Tan Y, Cai XS, Fulco CP, Nasser J, Mualim KS, Bergman DT, Ray J, Jagoda E, Munger CJ, Gschwind AR, Sheth MU, Tan AS, Pulido SG, Mitra N, Weisz D, Shamim MS, Durand NC, Mahajan R, Khan R, Steinmetz LM, Kanemaki MT, Lander ES, Meissner A, Aiden EL, Engreitz JM. Guckelberger P, et al. Among authors: durand nc. bioRxiv [Preprint]. 2024 Jul 22:2024.07.12.603288. doi: 10.1101/2024.07.12.603288. bioRxiv. 2024. PMID: 39026740 Free PMC article. Preprint.
Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample.
Sandoval-Velasco M, Dudchenko O, Rodríguez JA, Pérez Estrada C, Dehasque M, Fontsere C, Mak SST, Khan R, Contessoto VG, Oliveira Junior AB, Kalluchi A, Zubillaga Herrera BJ, Jeong J, Roy RP, Christopher I, Weisz D, Omer AD, Batra SS, Shamim MS, Durand NC, O'Connell B, Roca AL, Plikus MV, Kusliy MA, Romanenko SA, Lemskaya NA, Serdyukova NA, Modina SA, Perelman PL, Kizilova EA, Baiborodin SI, Rubtsov NB, Machol G, Rath K, Mahajan R, Kaur P, Gnirke A, Garcia-Treviño I, Coke R, Flanagan JP, Pletch K, Ruiz-Herrera A, Plotnikov V, Pavlov IS, Pavlova NI, Protopopov AV, Di Pierro M, Graphodatsky AS, Lander ES, Rowley MJ, Wolynes PG, Onuchic JN, Dalén L, Marti-Renom MA, Gilbert MTP, Aiden EL. Sandoval-Velasco M, et al. Among authors: durand nc. Cell. 2024 Jul 11;187(14):3541-3562.e51. doi: 10.1016/j.cell.2024.06.002. Cell. 2024. PMID: 38996487 Free article.
A rapid, low-cost, and highly sensitive SARS-CoV-2 diagnostic based on whole-genome sequencing.
Adastra PA, Durand NC, Mitra N, Pulido SG, Mahajan R, Blackburn A, Colaric ZL, Theisen JWM, Weisz D, Dudchenko O, Gnirke A, Rao SSP, Kaur P, Aiden EL, Aiden AP. Adastra PA, et al. Among authors: durand nc. PLoS One. 2023 Nov 30;18(11):e0294283. doi: 10.1371/journal.pone.0294283. eCollection 2023. PLoS One. 2023. PMID: 38032990 Free PMC article.
An encyclopedia of enhancer-gene regulatory interactions in the human genome.
Gschwind AR, Mualim KS, Karbalayghareh A, Sheth MU, Dey KK, Jagoda E, Nurtdinov RN, Xi W, Tan AS, Jones H, Ma XR, Yao D, Nasser J, Avsec Ž, James BT, Shamim MS, Durand NC, Rao SSP, Mahajan R, Doughty BR, Andreeva K, Ulirsch JC, Fan K, Perez EM, Nguyen TC, Kelley DR, Finucane HK, Moore JE, Weng Z, Kellis M, Bassik MC, Price AL, Beer MA, Guigó R, Stamatoyannopoulos JA, Lieberman Aiden E, Greenleaf WJ, Leslie CS, Steinmetz LM, Kundaje A, Engreitz JM. Gschwind AR, et al. Among authors: durand nc. bioRxiv [Preprint]. 2023 Nov 13:2023.11.09.563812. doi: 10.1101/2023.11.09.563812. bioRxiv. 2023. PMID: 38014075 Free PMC article. Preprint.
The ENCODE Uniform Analysis Pipelines.
Hitz BC, Lee JW, Jolanki O, Kagda MS, Graham K, Sud P, Gabdank I, Strattan JS, Sloan CA, Dreszer T, Rowe LD, Podduturi NR, Malladi VS, Chan ET, Davidson JM, Ho M, Miyasato S, Simison M, Tanaka F, Luo Y, Whaling I, Hong EL, Lee BT, Sandstrom R, Rynes E, Nelson J, Nishida A, Ingersoll A, Buckley M, Frerker M, Kim DS, Boley N, Trout D, Dobin A, Rahmanian S, Wyman D, Balderrama-Gutierrez G, Reese F, Durand NC, Dudchenko O, Weisz D, Rao SSP, Blackburn A, Gkountaroulis D, Sadr M, Olshansky M, Eliaz Y, Nguyen D, Bochkov I, Shamim MS, Mahajan R, Aiden E, Gingeras T, Heath S, Hirst M, Kent WJ, Kundaje A, Mortazavi A, Wold B, Cherry JM. Hitz BC, et al. Among authors: durand nc. Res Sq [Preprint]. 2023 Jul 19:rs.3.rs-3111932. doi: 10.21203/rs.3.rs-3111932/v1. Res Sq. 2023. PMID: 37503119 Free PMC article. Preprint.
The ENCODE Uniform Analysis Pipelines.
Hitz BC, Jin-Wook L, Jolanki O, Kagda MS, Graham K, Sud P, Gabdank I, Strattan JS, Sloan CA, Dreszer T, Rowe LD, Podduturi NR, Malladi VS, Chan ET, Davidson JM, Ho M, Miyasato S, Simison M, Tanaka F, Luo Y, Whaling I, Hong EL, Lee BT, Sandstrom R, Rynes E, Nelson J, Nishida A, Ingersoll A, Buckley M, Frerker M, Kim DS, Boley N, Trout D, Dobin A, Rahmanian S, Wyman D, Balderrama-Gutierrez G, Reese F, Durand NC, Dudchenko O, Weisz D, Rao SSP, Blackburn A, Gkountaroulis D, Sadr M, Olshansky M, Eliaz Y, Nguyen D, Bochkov I, Shamim MS, Mahajan R, Aiden E, Gingeras T, Heath S, Hirst M, Kent WJ, Kundaje A, Mortazavi A, Wold B, Cherry JM. Hitz BC, et al. Among authors: durand nc. bioRxiv [Preprint]. 2023 Apr 6:2023.04.04.535623. doi: 10.1101/2023.04.04.535623. bioRxiv. 2023. PMID: 37066421 Free PMC article. Preprint.
Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement.
Garg V, Dudchenko O, Wang J, Khan AW, Gupta S, Kaur P, Han K, Saxena RK, Kale SM, Pham M, Yu J, Chitikineni A, Zhang Z, Fan G, Lui C, Valluri V, Meng F, Bhandari A, Liu X, Yang T, Chen H, Valliyodan B, Roorkiwal M, Shi C, Yang HB, Durand NC, Pandey MK, Li G, Barmukh R, Wang X, Chen X, Lam HM, Jiang H, Zong X, Liang X, Liu X, Liao B, Guo B, Jackson S, Nguyen HT, Zhuang W, Shubo W, Wang X, Aiden EL, Bennetzen JL, Varshney RK. Garg V, et al. Among authors: durand nc. J Adv Res. 2022 Dec;42:315-329. doi: 10.1016/j.jare.2021.10.009. Epub 2021 Nov 3. J Adv Res. 2022. PMID: 36513421 Free PMC article.
26 results