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DeepComBat: A Statistically Motivated, Hyperparameter-Robust, Deep Learning Approach to Harmonization of Neuroimaging Data.
Hu F, Lucas A, Chen AA, Coleman K, Horng H, Ng RWS, Tustison NJ, Davis KA, Shou H, Li M, Shinohara RT; Alzheimer’s Disease Neuroimaging Initiative. Hu F, et al. Among authors: coleman k. bioRxiv [Preprint]. 2023 Apr 24:2023.04.24.537396. doi: 10.1101/2023.04.24.537396. bioRxiv. 2023. Update in: Hum Brain Mapp. 2024 Aug 1;45(11):e26708. doi: 10.1002/hbm.26708. PMID: 37163042 Free PMC article. Updated. Preprint.
Unlocking the power of spatial omics with AI.
Coleman K, Schroeder A, Li M. Coleman K, et al. Nat Methods. 2024 Aug;21(8):1378-1381. doi: 10.1038/s41592-024-02363-x. Nat Methods. 2024. PMID: 39122938 No abstract available.
Spatial Single-cell Analysis Decodes Cortical Layer and Area Specification.
Qian X, Coleman K, Jiang S, Kriz AJ, Marciano JH, Luo C, Cai C, Manam MD, Caglayan E, Otani A, Ghosh U, Shao DD, Andersen RE, Neil JE, Johnson R, LeFevre A, Hecht JL, Miller MB, Sun L, Stringer C, Li M, Walsh CA. Qian X, et al. Among authors: coleman k. bioRxiv [Preprint]. 2024 Jun 10:2024.06.05.597673. doi: 10.1101/2024.06.05.597673. bioRxiv. 2024. PMID: 38915567 Free PMC article. Preprint.
A subpopulation of lipogenic brown adipocytes drives thermogenic memory.
Lundgren P, Sharma PV, Dohnalová L, Coleman K, Uhr GT, Kircher S, Litichevskiy L, Bahnsen K, Descamps HC, Demetriadou C, Chan J, Chellappa K, Cox TO, Heyman Y, Pather SR, Shoffler C, Petucci C, Shalem O, Raj A, Baur JA, Snyder NW, Wellen KE, Levy M, Seale P, Li M, Thaiss CA. Lundgren P, et al. Among authors: coleman k. Nat Metab. 2023 Oct;5(10):1691-1705. doi: 10.1038/s42255-023-00893-w. Epub 2023 Oct 2. Nat Metab. 2023. PMID: 37783943 Free PMC article.
Single-cell multi-omic and spatial profiling of human kidneys implicates the fibrotic microenvironment in kidney disease progression.
Abedini A, Levinsohn J, Klötzer KA, Dumoulin B, Ma Z, Frederick J, Dhillon P, Balzer MS, Shrestha R, Liu H, Vitale S, Bergeson AM, Devalaraja-Narashimha K, Grandi P, Bhattacharyya T, Hu E, Pullen SS, Boustany-Kari CM, Guarnieri P, Karihaloo A, Traum D, Yan H, Coleman K, Palmer M, Sarov-Blat L, Morton L, Hunter CA, Kaestner KH, Li M, Susztak K. Abedini A, et al. Among authors: coleman k. Nat Genet. 2024 Aug;56(8):1712-1724. doi: 10.1038/s41588-024-01802-x. Epub 2024 Jul 24. Nat Genet. 2024. PMID: 39048792
894 results