Macher JN - Search Results

1

Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna.

Macher JN, Martínez A, Çakir S, Cholley PE, Christoforou E, Curini Galletti M, van Galen L, García-Cobo M, Jondelius U, de Jong D, Leasi F, Lemke M, Rubio Lopez I, Sánchez N, Sørensen MV, Todaro MA, Renema W, Fontaneto D. Macher JN, et al. Mol Ecol Resour. 2024 Oct;24(7):e13997. doi: 10.1111/1755-0998.13997. Epub 2024 Jul 31. Mol Ecol Resour. 2024. PMID: 39086104

2

COI metabarcoding of large benthic Foraminifera: Method validation for application in ecological studies.

Girard EB, Macher JN, Jompa J, Renema W. Girard EB, et al. Among authors: macher jn. Ecol Evol. 2022 Nov 22;12(11):e9549. doi: 10.1002/ece3.9549. eCollection 2022 Nov. Ecol Evol. 2022. PMID: 36440313 Free PMC article.

3

Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers.

Macher JN, Bloska DM, Holzmann M, Girard EB, Pawlowski J, Renema W. Macher JN, et al. PeerJ. 2022 Sep 5;10:e13952. doi: 10.7717/peerj.13952. eCollection 2022. PeerJ. 2022. PMID: 36093332 Free PMC article.

4

Uncovering bacterial and functional diversity in macroinvertebrate mitochondrial-metagenomic datasets by differential centrifugation.

Macher JN, Speksnijder A, Choo LQ, van der Hoorn B, Renema W. Macher JN, et al. Sci Rep. 2019 Jul 16;9(1):10257. doi: 10.1038/s41598-019-46717-4. Sci Rep. 2019. PMID: 31312027 Free PMC article.

5

First report of mitochondrial COI in foraminifera and implications for DNA barcoding.

Macher JN, Wideman JG, Girard EB, Langerak A, Duijm E, Jompa J, Sadekov A, Vos R, Wissels R, Renema W. Macher JN, et al. Sci Rep. 2021 Nov 12;11(1):22165. doi: 10.1038/s41598-021-01589-5. Sci Rep. 2021. PMID: 34772985 Free PMC article.

6

Integrating morphology and metagenomics to understand taxonomic variability of Amphisorus (Foraminifera, Miliolida) from Western Australia and Indonesia.

Macher JN, Prazeres M, Taudien S, Jompa J, Sadekov A, Renema W. Macher JN, et al. PLoS One. 2021 Jan 4;16(1):e0244616. doi: 10.1371/journal.pone.0244616. eCollection 2021. PLoS One. 2021. PMID: 33395419 Free PMC article.

7

Comparison of environmental DNA and bulk-sample metabarcoding using highly degenerate cytochrome c oxidase I primers.

Macher JN, Vivancos A, Piggott JJ, Centeno FC, Matthaei CD, Leese F. Macher JN, et al. Mol Ecol Resour. 2018 Nov;18(6):1456-1468. doi: 10.1111/1755-0998.12940. Epub 2018 Sep 9. Mol Ecol Resour. 2018. PMID: 30129704

8

Assessing the influence of sample tagging and library preparation on DNA metabarcoding.

Zizka VMA, Elbrecht V, Macher JN, Leese F. Zizka VMA, et al. Among authors: macher jn. Mol Ecol Resour. 2019 Jul;19(4):893-899. doi: 10.1111/1755-0998.13018. Epub 2019 May 5. Mol Ecol Resour. 2019. PMID: 30963710

9

Single-Cell Genomics Reveals the Divergent Mitochondrial Genomes of Retaria (Foraminifera and Radiolaria).

Macher JN, Coots NL, Poh YP, Girard EB, Langerak A, Muñoz-Gómez SA, Sinha SD, Jirsová D, Vos R, Wissels R, Gile GH, Renema W, Wideman JG. Macher JN, et al. mBio. 2023 Apr 25;14(2):e0030223. doi: 10.1128/mbio.00302-23. Epub 2023 Mar 20. mBio. 2023. PMID: 36939357 Free PMC article.

10

The mitochondrial genome of Nemalecium lighti (Hydrozoa, Leptothecata).

Macher JN, Kayal E, Duijm E, van der Hoorn B, Montano S, Speksnijder A. Macher JN, et al. Mitochondrial DNA B Resour. 2021 Oct 14;6(11):3196-3198. doi: 10.1080/23802359.2021.1989335. eCollection 2021. Mitochondrial DNA B Resour. 2021. PMID: 34660901 Free PMC article.

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