Sha CM - Search Results

1

Unveiling the double-edged sword: SOD1 trimers possess tissue-selective toxicity and bind septin-7 in motor neuron-like cells.

Choi ES, Hnath B, Sha CM, Dokholyan NV. Choi ES, et al. Among authors: sha cm. Structure. 2024 Oct 3;32(10):1776-1792.e5. doi: 10.1016/j.str.2024.08.002. Epub 2024 Aug 28. Structure. 2024. PMID: 39208794

2

NeuralDock: Rapid and Conformation-Agnostic Docking of Small Molecules.

Sha CM, Wang J, Dokholyan NV. Sha CM, et al. Front Mol Biosci. 2022 Mar 22;9:867241. doi: 10.3389/fmolb.2022.867241. eCollection 2022. Front Mol Biosci. 2022. PMID: 35392534 Free PMC article.

3

Activation of Disulfide Redox Switch in REDD1 Promotes Oxidative Stress Under Hyperglycemic Conditions.

Miller WP, Sha CM, Sunilkumar S, Toro AL, VanCleave AM, Kimball SR, Dokholyan NV, Dennis MD. Miller WP, et al. Among authors: sha cm. Diabetes. 2022 Dec 1;71(12):2764-2776. doi: 10.2337/db22-0355. Diabetes. 2022. PMID: 36170669 Free PMC article.

4

Differentiable rotamer sampling with molecular force fields.

Sha CM, Wang J, Dokholyan NV. Sha CM, et al. ArXiv [Preprint]. 2023 Feb 22:arXiv:2302.11430v1. ArXiv. 2023. Update in: Brief Bioinform. 2023 Nov 22;25(1):bbad456. doi: 10.1093/bib/bbad456 PMID: 36866228 Free PMC article. Updated. Preprint.

5

Big versus small: The impact of aggregate size in disease.

Hnath B, Chen J, Reynolds J, Choi E, Wang J, Zhang D, Sha CM, Dokholyan NV. Hnath B, et al. Among authors: sha cm. Protein Sci. 2023 Jul;32(7):e4686. doi: 10.1002/pro.4686. Protein Sci. 2023. PMID: 37243896 Free PMC article. Review.

6

Quantifying network behavior in the rat prefrontal cortex: a reproducibility crisis.

Sha CM, Wang J, Mailman RB, Yang Y, Dokholyan NV. Sha CM, et al. bioRxiv [Preprint]. 2023 Aug 15:2023.05.16.541018. doi: 10.1101/2023.05.16.541018. bioRxiv. 2023. Update in: Front Comput Neurosci. 2024 Aug 29;18:1293279. doi: 10.3389/fncom.2024.1293279 PMID: 37292872 Free PMC article. Updated. Preprint.

7

Combining Experimental Restraints and RNA 3D Structure Prediction in RNA Nanotechnology.

Wang J, Sha CM, Dokholyan NV. Wang J, et al. Among authors: sha cm. Methods Mol Biol. 2023;2709:51-64. doi: 10.1007/978-1-0716-3417-2_3. Methods Mol Biol. 2023. PMID: 37572272 Free PMC article.

8

Predicting 3D RNA structure from the nucleotide sequence using Euclidean neural networks.

Sha CM, Wang J, Dokholyan NV. Sha CM, et al. Biophys J. 2024 Sep 3;123(17):2671-2681. doi: 10.1016/j.bpj.2023.10.011. Epub 2023 Oct 14. Biophys J. 2024. PMID: 37838833

9

Differentiable rotamer sampling with molecular force fields.

Sha CM, Wang J, Dokholyan NV. Sha CM, et al. Brief Bioinform. 2023 Nov 22;25(1):bbad456. doi: 10.1093/bib/bbad456. Brief Bioinform. 2023. PMID: 38095857 Free PMC article.

10

Whole proteome mapping of compound-protein interactions.

Chirasani VR, Wang J, Sha C, Raup-Konsavage W, Vrana K, Dokholyan NV. Chirasani VR, et al. Curr Res Chem Biol. 2022;2:100035. doi: 10.1016/j.crchbi.2022.100035. Epub 2022 Sep 12. Curr Res Chem Biol. 2022. PMID: 38125869 Free PMC article.

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