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Machine learning to attribute the source of Campylobacter infections in the United States: A retrospective analysis of national surveillance data.
Pascoe B, Futcher G, Pensar J, Bayliss SC, Mourkas E, Calland JK, Hitchings MD, Joseph LA, Lane CG, Greenlee T, Arning N, Wilson DJ, Jolley KA, Corander J, Maiden MCJ, Parker CT, Cooper KK, Rose EB, Hiett K, Bruce BB, Sheppard SK. Pascoe B, et al. Among authors: hitchings md. J Infect. 2024 Nov;89(5):106265. doi: 10.1016/j.jinf.2024.106265. Epub 2024 Sep 7. J Infect. 2024. PMID: 39245152 Free article.
From Escherich to the Escherichia coli genome.
Méric G, Hitchings MD, Pascoe B, Sheppard SK. Méric G, et al. Among authors: hitchings md. Lancet Infect Dis. 2016 Jun;16(6):634-636. doi: 10.1016/S1473-3099(16)30066-4. Lancet Infect Dis. 2016. PMID: 27301915 No abstract available.
Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus.
Murray S, Pascoe B, Méric G, Mageiros L, Yahara K, Hitchings MD, Friedmann Y, Wilkinson TS, Gormley FJ, Mack D, Bray JE, Lamble S, Bowden R, Jolley KA, Maiden MCJ, Wendlandt S, Schwarz S, Corander J, Fitzgerald JR, Sheppard SK. Murray S, et al. Among authors: hitchings md. Genome Biol Evol. 2017 Apr 1;9(4):830-842. doi: 10.1093/gbe/evx037. Genome Biol Evol. 2017. PMID: 28338786 Free PMC article.
Bayesian identification of bacterial strains from sequencing data.
Sankar A, Malone B, Bayliss SC, Pascoe B, Méric G, Hitchings MD, Sheppard SK, Feil EJ, Corander J, Honkela A. Sankar A, et al. Among authors: hitchings md. Microb Genom. 2016 Aug 25;2(8):e000075. doi: 10.1099/mgen.0.000075. eCollection 2016 Aug. Microb Genom. 2016. PMID: 28348870 Free PMC article.
Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.
Pascoe B, Méric G, Yahara K, Wimalarathna H, Murray S, Hitchings MD, Sproston EL, Carrillo CD, Taboada EN, Cooper KK, Huynh S, Cody AJ, Jolley KA, Maiden MCJ, McCarthy ND, Didelot X, Parker CT, Sheppard SK. Pascoe B, et al. Among authors: hitchings md. Mol Ecol. 2017 Sep;26(17):4497-4508. doi: 10.1111/mec.14176. Epub 2017 Jun 19. Mol Ecol. 2017. PMID: 28493321 Free PMC article.
83 results