Lai Y - Search Results

1

A novel approach to the analysis of Overall Survival (OS) as response with Progression-Free Interval (PFI) as condition based on the RNA-seq expression data in The Cancer Genome Atlas (TCGA).

Lin B, Wang K, Yuan Y, Wang Y, Liu Q, Wang Y, Sun J, Wang W, Wang H, Zhou S, Jin K, Zhang M, Lai Y. Lin B, et al. Among authors: lai y. BMC Bioinformatics. 2024 Sep 13;25(1):300. doi: 10.1186/s12859-024-05897-1. BMC Bioinformatics. 2024. PMID: 39271985 Free PMC article.

2

An efficient concordant integrative analysis of multiple large-scale two-sample expression data sets.

Lai Y, Zhang F, Nayak TK, Modarres R, Lee NH, McCaffrey TA. Lai Y, et al. Bioinformatics. 2017 Dec 1;33(23):3852-3860. doi: 10.1093/bioinformatics/btx061. Bioinformatics. 2017. PMID: 28174897 Free PMC article.

3

Improvements Achieved by Multiple Imputation for Single-Cell RNA-Seq Data in Clustering Analysis and Differential Expression Analysis.

Zhu M, Lai Y. Zhu M, et al. Among authors: lai y. J Comput Biol. 2022 Jul;29(7):634-649. doi: 10.1089/cmb.2021.0597. Epub 2022 May 16. J Comput Biol. 2022. PMID: 35575729

4

A statistical method for the conservative adjustment of false discovery rate (q-value).

Lai Y. Lai Y. BMC Bioinformatics. 2017 Mar 14;18(Suppl 3):69. doi: 10.1186/s12859-017-1474-6. BMC Bioinformatics. 2017. PMID: 28361675 Free PMC article.

5

A statistical framework for integrating two microarray data sets in differential expression analysis.

Lai Y, Eckenrode SE, She JX. Lai Y, et al. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S23. doi: 10.1186/1471-2105-10-S1-S23. BMC Bioinformatics. 2009. PMID: 19208123 Free PMC article.

6

Differential expression analysis of Digital Gene Expression data: RNA-tag filtering, comparison of t-type tests and their genome-wide co-expression based adjustments.

Lai Y. Lai Y. Int J Bioinform Res Appl. 2010;6(4):353-65. doi: 10.1504/IJBRA.2010.035999. Int J Bioinform Res Appl. 2010. PMID: 20940123 Free PMC article.

7

Genome-wide co-expression based prediction of differential expressions.

Lai Y. Lai Y. Bioinformatics. 2008 Mar 1;24(5):666-73. doi: 10.1093/bioinformatics/btm507. Epub 2007 Nov 15. Bioinformatics. 2008. PMID: 18006554

8

Detecting discordance enrichment among a series of two-sample genome-wide expression data sets.

Lai Y, Zhang F, Nayak TK, Modarres R, Lee NH, McCaffrey TA. Lai Y, et al. BMC Genomics. 2017 Jan 25;18(Suppl 1):1050. doi: 10.1186/s12864-016-3265-2. BMC Genomics. 2017. PMID: 28198679 Free PMC article.

9

A distance-type measure approach to the analysis of copy number variation in DNA sequencing data.

Biswas B, Lai Y. Biswas B, et al. Among authors: lai y. BMC Genomics. 2019 Apr 4;20(Suppl 2):195. doi: 10.1186/s12864-019-5491-x. BMC Genomics. 2019. PMID: 30967117 Free PMC article.

10

A censored beta mixture model for the estimation of the proportion of non-differentially expressed genes.

Markitsis A, Lai Y. Markitsis A, et al. Among authors: lai y. Bioinformatics. 2010 Mar 1;26(5):640-6. doi: 10.1093/bioinformatics/btq001. Epub 2010 Jan 15. Bioinformatics. 2010. PMID: 20080506 Free PMC article.

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