Mirny LA - Search Results

1

Cohesin-mediated chromatin remodeling controls the differentiation and function of conventional dendritic cells.

Adams NM, Galitsyna A, Tiniakou I, Esteva E, Lau CM, Reyes J, Abdennur N, Shkolikov A, Yap GS, Khodadadi-Jamayran A, Mirny LA, Reizis B. Adams NM, et al. Among authors: mirny la. bioRxiv [Preprint]. 2024 Oct 30:2024.09.18.613709. doi: 10.1101/2024.09.18.613709. bioRxiv. 2024. PMID: 39345451 Free PMC article. Preprint.

2

Isoform-Specific Expression and Feedback Regulation of E Protein TCF4 Control Dendritic Cell Lineage Specification.

Grajkowska LT, Ceribelli M, Lau CM, Warren ME, Tiniakou I, Nakandakari Higa S, Bunin A, Haecker H, Mirny LA, Staudt LM, Reizis B. Grajkowska LT, et al. Among authors: mirny la. Immunity. 2017 Jan 17;46(1):65-77. doi: 10.1016/j.immuni.2016.11.006. Epub 2016 Dec 13. Immunity. 2017. PMID: 27986456 Free PMC article.

3

Two major mechanisms of chromosome organization.

Mirny LA, Imakaev M, Abdennur N. Mirny LA, et al. Curr Opin Cell Biol. 2019 Jun;58:142-152. doi: 10.1016/j.ceb.2019.05.001. Epub 2019 Jun 20. Curr Opin Cell Biol. 2019. PMID: 31228682 Free PMC article. Review.

4

Chromatin organization by an interplay of loop extrusion and compartmental segregation.

Nuebler J, Fudenberg G, Imakaev M, Abdennur N, Mirny LA. Nuebler J, et al. Among authors: mirny la. Proc Natl Acad Sci U S A. 2018 Jul 17;115(29):E6697-E6706. doi: 10.1073/pnas.1717730115. Epub 2018 Jul 2. Proc Natl Acad Sci U S A. 2018. PMID: 29967174 Free PMC article.

5

Cooler: scalable storage for Hi-C data and other genomically labeled arrays.

Abdennur N, Mirny LA. Abdennur N, et al. Among authors: mirny la. Bioinformatics. 2020 Jan 1;36(1):311-316. doi: 10.1093/bioinformatics/btz540. Bioinformatics. 2020. PMID: 31290943 Free PMC article.

6

Diverse silent chromatin states modulate genome compartmentalization and loop extrusion barriers.

Spracklin G, Abdennur N, Imakaev M, Chowdhury N, Pradhan S, Mirny LA, Dekker J. Spracklin G, et al. Among authors: mirny la. Nat Struct Mol Biol. 2023 Jan;30(1):38-51. doi: 10.1038/s41594-022-00892-7. Epub 2022 Dec 22. Nat Struct Mol Biol. 2023. PMID: 36550219 Free PMC article.

7

ZFX controls propagation and prevents differentiation of acute T-lymphoblastic and myeloid leukemia.

Weisberg SP, Smith-Raska MR, Esquilin JM, Zhang J, Arenzana TL, Lau CM, Churchill M, Pan H, Klinakis A, Dixon JE, Mirny LA, Mukherjee S, Reizis B. Weisberg SP, et al. Among authors: mirny la. Cell Rep. 2014 Feb 13;6(3):528-40. doi: 10.1016/j.celrep.2014.01.007. Epub 2014 Jan 30. Cell Rep. 2014. PMID: 24485662 Free PMC article.

8

Two independent modes of chromatin organization revealed by cohesin removal.

Schwarzer W, Abdennur N, Goloborodko A, Pekowska A, Fudenberg G, Loe-Mie Y, Fonseca NA, Huber W, Haering CH, Mirny L, Spitz F. Schwarzer W, et al. Nature. 2017 Nov 2;551(7678):51-56. doi: 10.1038/nature24281. Epub 2017 Sep 27. Nature. 2017. PMID: 29094699 Free PMC article.

9

Emerging Evidence of Chromosome Folding by Loop Extrusion.

Fudenberg G, Abdennur N, Imakaev M, Goloborodko A, Mirny LA. Fudenberg G, et al. Among authors: mirny la. Cold Spring Harb Symp Quant Biol. 2017;82:45-55. doi: 10.1101/sqb.2017.82.034710. Epub 2018 May 4. Cold Spring Harb Symp Quant Biol. 2017. PMID: 29728444 Free PMC article.

10

Formation of Chromosomal Domains by Loop Extrusion.

Fudenberg G, Imakaev M, Lu C, Goloborodko A, Abdennur N, Mirny LA. Fudenberg G, et al. Among authors: mirny la. Cell Rep. 2016 May 31;15(9):2038-49. doi: 10.1016/j.celrep.2016.04.085. Epub 2016 May 19. Cell Rep. 2016. PMID: 27210764 Free PMC article.

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