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233 results

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Page 1
Complete Genomic Characterization of Global Pathogens, Respiratory Syncytial Virus (RSV), and Human Norovirus (HuNoV) Using Probe-based Capture Enrichment.
Bhamidipati SV, Surathu A, Chao H, Agustinho DP, Xiang Q, Kottapalli K, Santhanam A, Momin Z, Walker K, Menon VK, Weissenberger G, Emerick N, Mahjabeen F, Meng Q, Hu J, Sucgang R, Henke D, Sedlazeck FJ, Khan Z, Metcalf GA, Avadhanula V, Piedra PA, Ramani S, Atmar RL, Estes MK, Petrosino JF, Gibbs RA, Muzny DM, Cregeen SJ, Doddapaneni H. Bhamidipati SV, et al. Among authors: petrosino jf. bioRxiv [Preprint]. 2024 Sep 16:2024.09.16.613242. doi: 10.1101/2024.09.16.613242. bioRxiv. 2024. PMID: 39345650 Free PMC article. Preprint.
Functional Genomics of Gastrointestinal Escherichia coli Isolated from Patients with Cancer and Diarrhea.
Carter H, Clark J, Carlin LG, Vaughan E, Rajan A, Olvera A, Yu X, Zeng XL, Kambal A, Holder M, Qin X, Gibbs RA, Petrosino JF, Muzny DM, Doddapaneni H, Menon VK, Hoffman KL, Meng Q, Ross MC, Javornik Cregeen SJ, Metcalf G, Jenq R, Blutt S, Estes MK; TMC-GCID team; Maresso A, Okhuysen PC. Carter H, et al. Among authors: petrosino jf. bioRxiv [Preprint]. 2023 Jun 1:2023.05.31.543115. doi: 10.1101/2023.05.31.543115. bioRxiv. 2023. PMID: 37398483 Free PMC article. Preprint.
Inter and intra-host diversity of RSV in hematopoietic stem cell transplant adults with normal and delayed viral clearance.
Avadhanula V, Agustinho DP, Menon VK, Chemaly RF, Shah DP, Qin X, Surathu A, Doddapaneni H, Muzny DM, Metcalf GA, Cregeen SJ, Gibbs RA, Petrosino JF, Sedlazeck FJ, Piedra PA. Avadhanula V, et al. Among authors: petrosino jf. Virus Evol. 2023 Dec 28;10(1):vead086. doi: 10.1093/ve/vead086. eCollection 2024. Virus Evol. 2023. PMID: 38361816 Free PMC article.
Examining intra-host genetic variation of RSV by short read high-throughput sequencing.
Henke D, Piedra FA, Avadhanula V, Doddapaneni H, Muzny DM, Menon VK, Hoffman KL, Ross MC, Javornik Cregeen SJ, Metcalf G, Gibbs RA, Petrosino JF, Piedra PA. Henke D, et al. Among authors: petrosino jf. bioRxiv [Preprint]. 2024 Sep 3:2023.05.17.541198. doi: 10.1101/2023.05.17.541198. bioRxiv. 2024. PMID: 39282457 Free PMC article. Preprint.
Wastewater pandemic preparedness: Toward an end-to-end pathogen monitoring program.
Clark JR, Terwilliger A, Avadhanula V, Tisza M, Cormier J, Javornik-Cregeen S, Ross MC, Hoffman KL, Troisi C, Hanson B, Petrosino J, Balliew J, Piedra PA, Rios J, Deegan J, Bauer C, Wu F, Mena KD, Boerwinkle E, Maresso AW. Clark JR, et al. Front Public Health. 2023 Mar 21;11:1137881. doi: 10.3389/fpubh.2023.1137881. eCollection 2023. Front Public Health. 2023. PMID: 37026145 Free PMC article.
Sequencing-Based Detection of Avian Influenza A(H5N1) Virus in Wastewater in Ten Cities.
Tisza MJ, Hanson BM, Clark JR, Wang L, Payne K, Ross MC, Mena KD, Gitter A, Javornik Cregeen SJ, Cormier J, Avadhanula V, Terwilliger A, Balliew J, Wu F, Rios J, Deegan J, Piedra PA, Petrosino JF, Boerwinkle E, Maresso AW. Tisza MJ, et al. Among authors: petrosino jf. N Engl J Med. 2024 Sep 26;391(12):1157-1159. doi: 10.1056/NEJMc2405937. Epub 2024 Sep 11. N Engl J Med. 2024. PMID: 39259887 No abstract available.
Maternal dysbiosis produces long-lasting behavioral changes in offspring.
Hudobenko J, Di Gesù CM, Mooz PR, Petrosino J, Putluri N, Ganesh BP, Rebeles K, Blixt FW, Venna VR, McCullough LD. Hudobenko J, et al. Mol Psychiatry. 2024 Oct 23. doi: 10.1038/s41380-024-02794-0. Online ahead of print. Mol Psychiatry. 2024. PMID: 39443733
Assessment of a SARS-CoV-2 wastewater monitoring program in El Paso, Texas, from November 2020 to June 2022.
Gitter A, Bauer C, Wu F, Ramphul R, Chavarria C, Zhang K, Petrosino J, Mezzari M, Gallegos G, Terwilliger AL, Clark JR, Feliz K, Avadhanula V, Piedra T, Weesner K, Maresso A, Mena KD. Gitter A, et al. Int J Environ Health Res. 2024 Jan;34(1):564-574. doi: 10.1080/09603123.2022.2159017. Epub 2023 Jan 3. Int J Environ Health Res. 2024. PMID: 36595614
Detection of enterovirus RNA in pancreas and lymphoid tissues of organ donors with type 1 diabetes.
Laiho JE, Oikarinen S, Morfopoulou S, Oikarinen M, Renner A, Depledge D, Ross MC, Gerling IC, Breuer J, Petrosino JF, Plagnol V, Pugliese A, Toniolo A, Lloyd RE, Hyöty H; JDRF nPOD-Virus Group. Laiho JE, et al. Among authors: petrosino jf. medRxiv [Preprint]. 2024 Sep 13:2024.09.11.24313112. doi: 10.1101/2024.09.11.24313112. medRxiv. 2024. PMID: 39314969 Free PMC article. Preprint.
233 results