Yuce M - Search Results

1

Exploring Druggable Binding Sites on the Class A GPCRs Using the Residue Interaction Network and Site Identification by Ligand Competitive Saturation.

Inan T, Yuce M, MacKerell AD Jr, Kurkcuoglu O. Inan T, et al. Among authors: yuce m. ACS Omega. 2024 Sep 13;9(38):40154-40171. doi: 10.1021/acsomega.4c06172. eCollection 2024 Sep 24. ACS Omega. 2024. PMID: 39346853 Free PMC article.

2

Exploring Allosteric Signaling in the Exit Tunnel of the Bacterial Ribosome by Molecular Dynamics Simulations and Residue Network Model.

Guzel P, Yildirim HZ, Yuce M, Kurkcuoglu O. Guzel P, et al. Among authors: yuce m. Front Mol Biosci. 2020 Sep 25;7:586075. doi: 10.3389/fmolb.2020.586075. eCollection 2020. Front Mol Biosci. 2020. PMID: 33102529 Free PMC article.

3

Repurposing of FDA-approved drugs against active site and potential allosteric drug-binding sites of COVID-19 main protease.

Yuce M, Cicek E, Inan T, Dag AB, Kurkcuoglu O, Sungur FA. Yuce M, et al. Proteins. 2021 Nov;89(11):1425-1441. doi: 10.1002/prot.26164. Epub 2021 Jul 5. Proteins. 2021. PMID: 34169568 Free PMC article.

4

Exploring species-specific inhibitors with multiple target sites on S. aureus pyruvate kinase using a computational workflow.

Yuce M, Sarica Z, Ates B, Kurkcuoglu O. Yuce M, et al. J Biomol Struct Dyn. 2023 May;41(8):3496-3510. doi: 10.1080/07391102.2022.2051743. Epub 2022 Mar 18. J Biomol Struct Dyn. 2023. PMID: 35302925

5

A computational workflow to determine drug candidates alternative to aminoglycosides targeting the decoding center of E. coli ribosome.

Yuce M, Ates B, Yasar NI, Sungur FA, Kurkcuoglu O. Yuce M, et al. J Mol Graph Model. 2024 Sep;131:108817. doi: 10.1016/j.jmgm.2024.108817. Epub 2024 Jul 3. J Mol Graph Model. 2024. PMID: 38976944

6

Tuning the surface hydrophobicity of polymer/nanoparticle composite films in the Wenzel regime by composition.

Yüce MY, Demirel AL, Menzel F. Yüce MY, et al. Langmuir. 2005 May 24;21(11):5073-8. doi: 10.1021/la050033y. Langmuir. 2005. PMID: 15896053

7

Video-based tracking of single molecules exhibiting directed in-frame motion.

Yüce MY, Jonás A, Erdoğan AT. Yüce MY, et al. Microsc Microanal. 2012 Aug;18(4):781-92. doi: 10.1017/S1431927612000451. Microsc Microanal. 2012. PMID: 22846783

8

Recent Advancements in Localization Technologies for Wireless Capsule Endoscopy: A Technical Review.

Ali MA, Tom N, Alsunaydih FN, Yuce MR. Ali MA, et al. Among authors: yuce mr. Sensors (Basel). 2025 Jan 4;25(1):253. doi: 10.3390/s25010253. Sensors (Basel). 2025. PMID: 39797045 Free PMC article. Review.

9

Exploring the Interaction of Biotinylated FcGamma RI and IgG1 Monoclonal Antibodies on Streptavidin-Coated Plasmonic Sensor Chips for Label-Free VEGF Detection.

Khaligh SS, Khalid-Salako F, Kurt H, Yüce M. Khaligh SS, et al. Among authors: yuce m. Biosensors (Basel). 2024 Dec 20;14(12):634. doi: 10.3390/bios14120634. Biosensors (Basel). 2024. PMID: 39727899 Free PMC article.

10

Fc-FcγRI Complexes: Molecular Dynamics Simulations Shed Light on Ectodomain D3's Potential Role in IgG Binding.

Kutlu A, Çapkın E, Adacan K, Yüce M. Kutlu A, et al. Among authors: yuce m. ACS Omega. 2024 Nov 28;9(50):49272-49282. doi: 10.1021/acsomega.4c06318. eCollection 2024 Dec 17. ACS Omega. 2024. PMID: 39713689 Free PMC article.

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