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Comparative genomics unravels a rich set of biosynthetic gene clusters with distinct evolutionary trajectories across fungal species (Termitomyces) farmed by termites.
Schmidt S, Murphy R, Vizueta J, Schierbech SK, Conlon BH, Kreuzenbeck NB, Vreeburg SME, van de Peppel LJJ, Aanen DK, Silué KS, Kone NA, Beemelmanns C, Weber T, Poulsen M. Schmidt S, et al. Among authors: weber t. Commun Biol. 2024 Oct 5;7(1):1269. doi: 10.1038/s42003-024-06887-y. Commun Biol. 2024. PMID: 39369058 Free PMC article.
MIBiG 2.0: a repository for biosynthetic gene clusters of known function.
Kautsar SA, Blin K, Shaw S, Navarro-Muñoz JC, Terlouw BR, van der Hooft JJJ, van Santen JA, Tracanna V, Suarez Duran HG, Pascal Andreu V, Selem-Mojica N, Alanjary M, Robinson SL, Lund G, Epstein SC, Sisto AC, Charkoudian LK, Collemare J, Linington RG, Weber T, Medema MH. Kautsar SA, et al. Among authors: weber t. Nucleic Acids Res. 2020 Jan 8;48(D1):D454-D458. doi: 10.1093/nar/gkz882. Nucleic Acids Res. 2020. PMID: 31612915 Free PMC article.
BiG-FAM: the biosynthetic gene cluster families database.
Kautsar SA, Blin K, Shaw S, Weber T, Medema MH. Kautsar SA, et al. Among authors: weber t. Nucleic Acids Res. 2021 Jan 8;49(D1):D490-D497. doi: 10.1093/nar/gkaa812. Nucleic Acids Res. 2021. PMID: 33010170 Free PMC article.
MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters.
Terlouw BR, Blin K, Navarro-Muñoz JC, Avalon NE, Chevrette MG, Egbert S, Lee S, Meijer D, Recchia MJJ, Reitz ZL, van Santen JA, Selem-Mojica N, Tørring T, Zaroubi L, Alanjary M, Aleti G, Aguilar C, Al-Salihi SAA, Augustijn HE, Avelar-Rivas JA, Avitia-Domínguez LA, Barona-Gómez F, Bernaldo-Agüero J, Bielinski VA, Biermann F, Booth TJ, Carrion Bravo VJ, Castelo-Branco R, Chagas FO, Cruz-Morales P, Du C, Duncan KR, Gavriilidou A, Gayrard D, Gutiérrez-García K, Haslinger K, Helfrich EJN, van der Hooft JJJ, Jati AP, Kalkreuter E, Kalyvas N, Kang KB, Kautsar S, Kim W, Kunjapur AM, Li YX, Lin GM, Loureiro C, Louwen JJR, Louwen NLL, Lund G, Parra J, Philmus B, Pourmohsenin B, Pronk LJU, Rego A, Rex DAB, Robinson S, Rosas-Becerra LR, Roxborough ET, Schorn MA, Scobie DJ, Singh KS, Sokolova N, Tang X, Udwary D, Vigneshwari A, Vind K, Vromans SPJM, Waschulin V, Williams SE, Winter JM, Witte TE, Xie H, Yang D, Yu J, Zdouc M, Zhong Z, Collemare J, Linington RG, Weber T, Medema MH. Terlouw BR, et al. Among authors: weber t. Nucleic Acids Res. 2023 Jan 6;51(D1):D603-D610. doi: 10.1093/nar/gkac1049. Nucleic Acids Res. 2023. PMID: 36399496 Free PMC article.
Biosynthesis of the Azoxy Compound Azodyrecin from Streptomyces mirabilis P8-A2.
Maleckis M, Wibowo M, Gren T, Jarmusch SA, Sterndorff EB, Booth T, Henriksen NNSE, Whitford CM, Jiang X, Jørgensen TS, Ding L, Weber T. Maleckis M, et al. Among authors: weber t. ACS Chem Biol. 2024 Mar 15;19(3):641-653. doi: 10.1021/acschembio.3c00632. Epub 2024 Feb 10. ACS Chem Biol. 2024. PMID: 38340355
2,548 results