Johnson CD - Search Results

1

Transcriptome profiling of two rice varieties reveals their molecular responses under high night-time temperature.

Mustahsan WK, Liang Y, Mohammed AR, Johnson CD, Septiningsih EM, Tarpley L, Thomson MJ. Mustahsan WK, et al. Among authors: johnson cd. PLoS One. 2024 Oct 10;19(10):e0311746. doi: 10.1371/journal.pone.0311746. eCollection 2024. PLoS One. 2024. PMID: 39388485 Free PMC article.

2

Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress.

Thapa R, Tabien RE, Johnson CD, Septiningsih EM. Thapa R, et al. Among authors: johnson cd. BMC Genomics. 2023 Apr 6;24(1):185. doi: 10.1186/s12864-023-09262-z. BMC Genomics. 2023. PMID: 37024819 Free PMC article.

3

Reference-Guided De Novo Genome Assembly to Dissect a QTL Region for Submergence Tolerance Derived from Ciherang-Sub1.

Liang Y, Wang S, Harper CL, Subramanian NK, Tabien RE, Johnson CD, Bailey-Serres J, Septiningsih EM. Liang Y, et al. Among authors: johnson cd. Plants (Basel). 2021 Dec 13;10(12):2740. doi: 10.3390/plants10122740. Plants (Basel). 2021. PMID: 34961210 Free PMC article.

4

RNA-seq analysis reveals different drought tolerance mechanisms in two broadly adapted wheat cultivars 'TAM 111' and 'TAM 112'.

Chu C, Wang S, Paetzold L, Wang Z, Hui K, Rudd JC, Xue Q, Ibrahim AMH, Metz R, Johnson CD, Rush CM, Liu S. Chu C, et al. Among authors: johnson cd. Sci Rep. 2021 Feb 22;11(1):4301. doi: 10.1038/s41598-021-83372-0. Sci Rep. 2021. PMID: 33619336 Free PMC article.

5

Transcriptome Analysis of Developing Grains from Wheat Cultivars TAM 111 and TAM 112 Reveal Cultivar-Specific Regulatory Networks.

Fang ZT, Kapoor R, Datta A, Liu S, Stull MA, Seitz PG, Johnson CD, Okumoto S. Fang ZT, et al. Among authors: johnson cd. Int J Mol Sci. 2022 Oct 21;23(20):12660. doi: 10.3390/ijms232012660. Int J Mol Sci. 2022. PMID: 36293517 Free PMC article.

6

Genome wide identification of QTL associated with yield and yield components in two popular wheat cultivars TAM 111 and TAM 112.

Yang Y, Dhakal S, Chu C, Wang S, Xue Q, Rudd JC, Ibrahim AMH, Jessup K, Baker J, Fuentealba MP, Devkota R, Baker S, Johnson CD, Metz R, Liu S. Yang Y, et al. Among authors: johnson cd. PLoS One. 2020 Dec 2;15(12):e0237293. doi: 10.1371/journal.pone.0237293. eCollection 2020. PLoS One. 2020. PMID: 33264303 Free PMC article.

7

Northern Bobwhite (Colinus virginianus) Mitochondrial Population Genomics Reveals Structure, Divergence, and Evidence for Heteroplasmy.

Halley YA, Oldeschulte DL, Bhattarai EK, Hill J, Metz RP, Johnson CD, Presley SM, Ruzicka RE, Rollins D, Peterson MJ, Murphy WJ, Seabury CM. Halley YA, et al. Among authors: johnson cd. PLoS One. 2015 Dec 29;10(12):e0144913. doi: 10.1371/journal.pone.0144913. eCollection 2015. PLoS One. 2015. PMID: 26713762 Free PMC article.

8

Translational control of lipogenic enzymes in the cell cycle of synchronous, growing yeast cells.

Blank HM, Perez R, He C, Maitra N, Metz R, Hill J, Lin Y, Johnson CD, Bankaitis VA, Kennedy BK, Aramayo R, Polymenis M. Blank HM, et al. Among authors: johnson cd. EMBO J. 2017 Feb 15;36(4):487-502. doi: 10.15252/embj.201695050. Epub 2017 Jan 5. EMBO J. 2017. PMID: 28057705 Free PMC article.

9

A Colletotrichum graminicola mutant deficient in the establishment of biotrophy reveals early transcriptional events in the maize anthracnose disease interaction.

Torres MF, Ghaffari N, Buiate EA, Moore N, Schwartz S, Johnson CD, Vaillancourt LJ. Torres MF, et al. Among authors: johnson cd. BMC Genomics. 2016 Mar 8;17:202. doi: 10.1186/s12864-016-2546-0. BMC Genomics. 2016. PMID: 26956617 Free PMC article.

10

Modeling the next generation sequencing sample processing pipeline for the purposes of classification.

Ghaffari N, Yousefi MR, Johnson CD, Ivanov I, Dougherty ER. Ghaffari N, et al. Among authors: johnson cd. BMC Bioinformatics. 2013 Oct 11;14:307. doi: 10.1186/1471-2105-14-307. BMC Bioinformatics. 2013. PMID: 24118904 Free PMC article.

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