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Individual patient and donor seroprofiles in convalescent plasma treatment of COVID-19 in REMAP-CAP clinical trial.
Nurmi V, Mayne R, Knight C, Almonacid-Mendoza HL, Secret S, Estcourt L, Hepojoki J, Šuštić T, Lamikanra AA, Tsang HP, Menon DK, Shankar-Hari M, van der Schoot CE, Vidarsson G, Roberts DJ, Simmonds P, Hedman K, Harvala H. Nurmi V, et al. Among authors: simmonds p. J Infect. 2025 Jan 9:106412. doi: 10.1016/j.jinf.2025.106412. Online ahead of print. J Infect. 2025. PMID: 39798805 Free article.
Genetic diversity of RNA viruses infecting invertebrate pests of rice.
Wang H, Chao S, Yan Q, Zhang S, Chen G, Mao C, Hu Y, Yu F, Wang S, Lv L, Yang B, He J, Zhang S, Zhang L, Simmonds P, Feng G. Wang H, et al. Among authors: simmonds p. Sci China Life Sci. 2024 Jan;67(1):175-187. doi: 10.1007/s11427-023-2398-y. Epub 2023 Nov 7. Sci China Life Sci. 2024. PMID: 37946067
Seasonal dynamics of the wild rodent faecal virome.
Raghwani J, Faust CL, François S, Nguyen D, Marsh K, Raulo A, Hill SC, Parag KV, Simmonds P, Knowles SCL, Pybus OG. Raghwani J, et al. Among authors: simmonds p. Mol Ecol. 2023 Sep;32(17):4763-4776. doi: 10.1111/mec.16778. Epub 2022 Nov 23. Mol Ecol. 2023. PMID: 36367339 Free PMC article.
CpG dinucleotide enrichment in the influenza A virus genome as a live attenuated vaccine development strategy.
Sharp CP, Thompson BH, Nash TJ, Diebold O, Pinto RM, Thorley L, Lin YT, Sives S, Wise H, Clohisey Hendry S, Grey F, Vervelde L, Simmonds P, Digard P, Gaunt ER. Sharp CP, et al. Among authors: simmonds p. PLoS Pathog. 2023 May 5;19(5):e1011357. doi: 10.1371/journal.ppat.1011357. eCollection 2023 May. PLoS Pathog. 2023. PMID: 37146066 Free PMC article.
Castanet: a pipeline for rapid analysis of targeted multi-pathogen genomic data.
Mayne R, Secret S, Geoghegan C, Trebes A, Kean K, Reid K, Lin GL, Ansari MA, de Cesare M, Bonsall D, Elliott I, Piazza P, Brown A, Bray J, Knight JC, Harvala H, Breuer J, Simmonds P, Bowden RJ, Golubchik T. Mayne R, et al. Among authors: simmonds p. Bioinformatics. 2024 Oct 1;40(10):btae591. doi: 10.1093/bioinformatics/btae591. Bioinformatics. 2024. PMID: 39360992 Free PMC article.
742 results