Molineris I - Search Results

1

Integrative ensemble modelling of cetuximab sensitivity in colorectal cancer patient-derived xenografts.

Perron U, Grassi E, Chatzipli A, Viviani M, Karakoc E, Trastulla L, Brochier LM, Isella C, Zanella ER, Klett H, Molineris I, Schueler J, Esteller M, Medico E, Conte N, McDermott U, Trusolino L, Bertotti A, Iorio F. Perron U, et al. Among authors: molineris i. Nat Commun. 2024 Nov 11;15(1):9139. doi: 10.1038/s41467-024-53163-y. Nat Commun. 2024. PMID: 39528460 Free PMC article.

2

Machine learning for RNA sequencing-based intrinsic subtyping of breast cancer.

Cascianelli S, Molineris I, Isella C, Masseroli M, Medico E. Cascianelli S, et al. Among authors: molineris i. Sci Rep. 2020 Aug 21;10(1):14071. doi: 10.1038/s41598-020-70832-2. Sci Rep. 2020. PMID: 32826944 Free PMC article.

3

KungFQ: a simple and powerful approach to compress fastq files.

Grassi E, Di Gregorio F, Molineris I. Grassi E, et al. Among authors: molineris i. IEEE/ACM Trans Comput Biol Bioinform. 2012 Nov-Dec;9(6):1837-42. doi: 10.1109/TCBB.2012.123. IEEE/ACM Trans Comput Biol Bioinform. 2012. PMID: 23221092

4

In silico prediction of lncRNA function using tissue specific and evolutionary conserved expression.

Perron U, Provero P, Molineris I. Perron U, et al. Among authors: molineris i. BMC Bioinformatics. 2017 Mar 23;18(Suppl 5):144. doi: 10.1186/s12859-017-1535-x. BMC Bioinformatics. 2017. PMID: 28361701 Free PMC article.

5

Total Binding Affinity Profiles of Regulatory Regions Predict Transcription Factor Binding and Gene Expression in Human Cells.

Grassi E, Zapparoli E, Molineris I, Provero P. Grassi E, et al. Among authors: molineris i. PLoS One. 2015 Nov 24;10(11):e0143627. doi: 10.1371/journal.pone.0143627. eCollection 2015. PLoS One. 2015. PMID: 26599758 Free PMC article.

6

Evolution of promoter affinity for transcription factors in the human lineage.

Molineris I, Grassi E, Ala U, Di Cunto F, Provero P. Molineris I, et al. Mol Biol Evol. 2011 Aug;28(8):2173-83. doi: 10.1093/molbev/msr027. Epub 2011 Feb 18. Mol Biol Evol. 2011. PMID: 21335606

7

Genome-wide identification and characterization of fixed human-specific regulatory regions.

Marnetto D, Molineris I, Grassi E, Provero P. Marnetto D, et al. Among authors: molineris i. Am J Hum Genet. 2014 Jul 3;95(1):39-48. doi: 10.1016/j.ajhg.2014.05.011. Am J Hum Genet. 2014. PMID: 24995867 Free PMC article.

8

Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries.

Grassi E, Mariella E, Lembo A, Molineris I, Provero P. Grassi E, et al. Among authors: molineris i. BMC Bioinformatics. 2016 Oct 18;17(1):423. doi: 10.1186/s12859-016-1254-8. BMC Bioinformatics. 2016. PMID: 27756200 Free PMC article.

9

A functional strategy to characterize expression Quantitative Trait Loci.

Grassi E, Mariella E, Forneris M, Marotta F, Catapano M, Molineris I, Provero P. Grassi E, et al. Among authors: molineris i. Hum Genet. 2017 Nov;136(11-12):1477-1487. doi: 10.1007/s00439-017-1849-9. Epub 2017 Nov 3. Hum Genet. 2017. PMID: 29101457

10

An atlas of tissue-specific conserved coexpression for functional annotation and disease gene prediction.

Piro RM, Ala U, Molineris I, Grassi E, Bracco C, Perego GP, Provero P, Di Cunto F. Piro RM, et al. Among authors: molineris i. Eur J Hum Genet. 2011 Nov;19(11):1173-80. doi: 10.1038/ejhg.2011.96. Epub 2011 Jun 8. Eur J Hum Genet. 2011. PMID: 21654723 Free PMC article.

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