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Page 1
Roadmap for naming uncultivated Archaea and Bacteria.
Murray AE, Freudenstein J, Gribaldo S, Hatzenpichler R, Hugenholtz P, Kämpfer P, Konstantinidis KT, Lane CE, Papke RT, Parks DH, Rossello-Mora R, Stott MB, Sutcliffe IC, Thrash JC, Venter SN, Whitman WB, Acinas SG, Amann RI, Anantharaman K, Armengaud J, Baker BJ, Barco RA, Bode HB, Boyd ES, Brady CL, Carini P, Chain PSG, Colman DR, DeAngelis KM, de Los Rios MA, Estrada-de Los Santos P, Dunlap CA, Eisen JA, Emerson D, Ettema TJG, Eveillard D, Girguis PR, Hentschel U, Hollibaugh JT, Hug LA, Inskeep WP, Ivanova EP, Klenk HP, Li WJ, Lloyd KG, Löffler FE, Makhalanyane TP, Moser DP, Nunoura T, Palmer M, Parro V, Pedrós-Alió C, Probst AJ, Smits THM, Steen AD, Steenkamp ET, Spang A, Stewart FJ, Tiedje JM, Vandamme P, Wagner M, Wang FP, Yarza P, Hedlund BP, Reysenbach AL. Murray AE, et al. Among authors: venter sn. Nat Microbiol. 2020 Aug;5(8):987-994. doi: 10.1038/s41564-020-0733-x. Epub 2020 Jun 8. Nat Microbiol. 2020. PMID: 32514073 Free PMC article. Review.
Development of the SeqCode: A proposed nomenclatural code for uncultivated prokaryotes with DNA sequences as type.
Whitman WB, Chuvochina M, Hedlund BP, Hugenholtz P, Konstantinidis KT, Murray AE, Palmer M, Parks DH, Probst AJ, Reysenbach AL, Rodriguez-R LM, Rossello-Mora R, Sutcliffe I, Venter SN. Whitman WB, et al. Among authors: venter sn. Syst Appl Microbiol. 2022 Sep;45(5):126305. doi: 10.1016/j.syapm.2022.126305. Epub 2022 Jul 20. Syst Appl Microbiol. 2022. PMID: 36049255 Free PMC article. Review.
SeqCode: a nomenclatural code for prokaryotes described from sequence data.
Hedlund BP, Chuvochina M, Hugenholtz P, Konstantinidis KT, Murray AE, Palmer M, Parks DH, Probst AJ, Reysenbach AL, Rodriguez-R LM, Rossello-Mora R, Sutcliffe IC, Venter SN, Whitman WB. Hedlund BP, et al. Among authors: venter sn. Nat Microbiol. 2022 Oct;7(10):1702-1708. doi: 10.1038/s41564-022-01214-9. Epub 2022 Sep 19. Nat Microbiol. 2022. PMID: 36123442 Free PMC article.
Description of two cultivated and two uncultivated new Salinibacter species, one named following the rules of the bacteriological code: Salinibacter grassmerensis sp. nov.; and three named following the rules of the SeqCode: Salinibacter pepae sp. nov., Salinibacter abyssi sp. nov., and Salinibacter pampae sp. nov.
Viver T, Conrad RE, Lucio M, Harir M, Urdiain M, Gago JF, Suárez-Suárez A, Bustos-Caparros E, Sanchez-Martinez R, Mayol E, Fassetta F, Pang J, Mădălin Gridan I, Venter S, Santos F, Baxter B, Llames ME, Cristea A, Banciu HL, Hedlund BP, Stott MB, Kämpfer P, Amann R, Schmitt-Kopplin P, Konstantinidis KT, Rossello-Mora R. Viver T, et al. Syst Appl Microbiol. 2023 May;46(3):126416. doi: 10.1016/j.syapm.2023.126416. Epub 2023 Mar 15. Syst Appl Microbiol. 2023. PMID: 36965279 Free article.
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