Yue Z - Search Results

1

RiceSNP-BST: a deep learning framework for predicting biotic stress-associated SNPs in rice.

Xu J, Gao Y, Lu Q, Zhang R, Gui J, Liu X, Yue Z. Xu J, et al. Among authors: yue z. Brief Bioinform. 2024 Sep 23;25(6):bbae599. doi: 10.1093/bib/bbae599. Brief Bioinform. 2024. PMID: 39562160 Free PMC article.

2

dbCID: a manually curated resource for exploring the driver indels in human cancer.

Yue Z, Zhao L, Cheng N, Yan H, Xia J. Yue Z, et al. Brief Bioinform. 2019 Sep 27;20(5):1925-1933. doi: 10.1093/bib/bby059. Brief Bioinform. 2019. PMID: 30016397

3

dbCPM: a manually curated database for exploring the cancer passenger mutations.

Yue Z, Zhao L, Xia J. Yue Z, et al. Brief Bioinform. 2020 Jan 17;21(1):309-317. doi: 10.1093/bib/bby105. Brief Bioinform. 2020. PMID: 30379998

4

PredCID: prediction of driver frameshift indels in human cancer.

Yue Z, Chu X, Xia J. Yue Z, et al. Brief Bioinform. 2021 May 20;22(3):bbaa119. doi: 10.1093/bib/bbaa119. Brief Bioinform. 2021. PMID: 32591774

5

RicENN: Prediction of Rice Enhancers with Neural Network Based on DNA Sequences.

Gao Y, Chen Y, Feng H, Zhang Y, Yue Z. Gao Y, et al. Among authors: yue z. Interdiscip Sci. 2022 Jun;14(2):555-565. doi: 10.1007/s12539-022-00503-5. Epub 2022 Feb 21. Interdiscip Sci. 2022. PMID: 35190950

6

MTAGCN: predicting miRNA-target associations in Camellia sinensis var. assamica through graph convolution neural network.

Feng H, Xiang Y, Wang X, Xue W, Yue Z. Feng H, et al. Among authors: yue z. BMC Bioinformatics. 2022 Jul 11;23(1):271. doi: 10.1186/s12859-022-04819-3. BMC Bioinformatics. 2022. PMID: 35820798 Free PMC article.

7

Named entity recognition of rice genes and phenotypes based on BiGRU neural networks.

Wu K, Xu L, Li X, Zhang Y, Yue Z, Gao Y, Chen Y. Wu K, et al. Among authors: yue z. Comput Biol Chem. 2024 Feb;108:107977. doi: 10.1016/j.compbiolchem.2023.107977. Epub 2023 Nov 3. Comput Biol Chem. 2024. PMID: 37995493

8

Crop-GPA: an integrated platform of crop gene-phenotype associations.

Gao Y, Zhou Q, Luo J, Xia C, Zhang Y, Yue Z. Gao Y, et al. Among authors: yue z. NPJ Syst Biol Appl. 2024 Feb 12;10(1):15. doi: 10.1038/s41540-024-00343-7. NPJ Syst Biol Appl. 2024. PMID: 38346982 Free PMC article.

9

Comprehensive Assessment of BERT-Based Methods for Predicting Antimicrobial Peptides.

Gao W, Zhao J, Gui J, Wang Z, Chen J, Yue Z. Gao W, et al. Among authors: yue z. J Chem Inf Model. 2024 Oct 14;64(19):7772-7785. doi: 10.1021/acs.jcim.4c00507. Epub 2024 Sep 24. J Chem Inf Model. 2024. PMID: 39316765

10

BES-Designer: A Web Tool to Design Guide RNAs for Base Editing to Simplify Library.

Zhou Q, Gao Q, Gao Y, Zhang Y, Chen Y, Li M, Wei P, Yue Z. Zhou Q, et al. Among authors: yue z. Interdiscip Sci. 2024 Oct 28. doi: 10.1007/s12539-024-00663-6. Online ahead of print. Interdiscip Sci. 2024. PMID: 39466357

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