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Combining NeuroPainting with transcriptomics reveals cell-type-specific morphological and molecular signatures of the 22q11.2 deletion.
Tegtmeyer M, Liyanage D, Han Y, Hebert KB, Pei R, Way GP, Ryder PV, Hawes D, Tromans-Coia C, Cimini BA, Carpenter AE, Singh S, Nehme R. Tegtmeyer M, et al. Among authors: cimini ba. bioRxiv [Preprint]. 2024 Nov 17:2024.11.16.623947. doi: 10.1101/2024.11.16.623947. bioRxiv. 2024. PMID: 39605350 Free PMC article. Preprint.
The crucial role of bioimage analysts in scientific research and publication.
Cimini BA, Bankhead P, D'Antuono R, Fazeli E, Fernandez-Rodriguez J, Fuster-Barceló C, Haase R, Jambor HK, Jones ML, Jug F, Klemm AH, Kreshuk A, Marcotti S, Martins GG, McArdle S, Miura K, Muñoz-Barrutia A, Murphy LC, Nelson MS, Nørrelykke SF, Paul-Gilloteaux P, Pengo T, Pylvänäinen JW, Pytowski L, Ravera A, Reinke A, Rekik Y, Strambio-De-Castillia C, Thédié D, Uhlmann V, Umney O, Wiggins L, Eliceiri KW. Cimini BA, et al. J Cell Sci. 2024 Oct 15;137(20):jcs262322. doi: 10.1242/jcs.262322. Epub 2024 Oct 30. J Cell Sci. 2024. PMID: 39475207
Pervasive mislocalization of pathogenic coding variants underlying human disorders.
Lacoste J, Haghighi M, Haider S, Reno C, Lin ZY, Segal D, Qian WW, Xiong X, Teelucksingh T, Miglietta E, Shafqat-Abbasi H, Ryder PV, Senft R, Cimini BA, Murray RR, Nyirakanani C, Hao T, McClain GG, Roth FP, Calderwood MA, Hill DE, Vidal M, Yi SS, Sahni N, Peng J, Gingras AC, Singh S, Carpenter AE, Taipale M. Lacoste J, et al. Among authors: cimini ba. Cell. 2024 Nov 14;187(23):6725-6741.e13. doi: 10.1016/j.cell.2024.09.003. Epub 2024 Sep 30. Cell. 2024. PMID: 39353438
Live Cell Painting: image-based profiling in live cells using Acridine Orange.
Garcia-Fossa F, Moraes-Lacerda T, Rodrigues-da-Silva M, Diaz-Rohrer B, Singh S, Carpenter AE, Cimini BA, de Jesus MB. Garcia-Fossa F, et al. Among authors: cimini ba. bioRxiv [Preprint]. 2024 Aug 29:2024.08.28.610144. doi: 10.1101/2024.08.28.610144. bioRxiv. 2024. PMID: 39257795 Free PMC article. Preprint.
Cell Painting Gallery: an open resource for image-based profiling.
Weisbart E, Kumar A, Arevalo J, Carpenter AE, Cimini BA, Singh S. Weisbart E, et al. Among authors: cimini ba. Nat Methods. 2024 Oct;21(10):1775-1777. doi: 10.1038/s41592-024-02399-z. Nat Methods. 2024. PMID: 39223397 No abstract available.
A postdoctoral training program in bioimage analysis.
Cimini BA, Tromans-Coia C, Stirling DR, Sivagurunathan S, Senft RA, Ryder PV, Miglietta E, Llanos P, Jamali N, Diaz-Rohrer B, Dasgupta S, Cruz M, Weisbart E, Carpenter AE. Cimini BA, et al. Mol Biol Cell. 2024 Sep 1;35(9):pe2. doi: 10.1091/mbc.E24-05-0214. Mol Biol Cell. 2024. PMID: 39105698 Free PMC article. Review.
Piximi - An Images to Discovery web tool for bioimages and beyond.
Moser LM, Gogoberidze N, Papaleo A, Lucas A, Dao D, Friedrich CA, Paavolainen L, Molnar C, Stirling DR, Hung J, Wang R, Tromans-Coia C, Li B, Evans EL 3rd, Eliceiri KW, Horvath P, Carpenter AE, Cimini BA. Moser LM, et al. Among authors: cimini ba. bioRxiv [Preprint]. 2024 Oct 10:2024.06.03.597232. doi: 10.1101/2024.06.03.597232. bioRxiv. 2024. PMID: 38895349 Free PMC article. Preprint.
68 results