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Cellular behavior analysis from live-cell imaging of TCR T cell-cancer cell interactions.
Verma A, Yu C, Bachl S, Lopez I, Schwartz M, Moen E, Kale N, Ching C, Miller G, Dougherty T, Pao E, Graf W, Ward C, Jena S, Marson A, Carnevale J, Van Valen D, Engelhardt BE. Verma A, et al. Among authors: engelhardt be. bioRxiv [Preprint]. 2024 Nov 21:2024.11.19.624390. doi: 10.1101/2024.11.19.624390. bioRxiv. 2024. PMID: 39605616 Free PMC article. Preprint.
Optimizing the design of spatial genomic studies.
Jones A, Cai D, Li D, Engelhardt BE. Jones A, et al. Among authors: engelhardt be. Nat Commun. 2024 Jun 11;15(1):4987. doi: 10.1038/s41467-024-49174-4. Nat Commun. 2024. PMID: 38862492 Free PMC article.
Alignment of spatial genomics data using deep Gaussian processes.
Jones A, Townes FW, Li D, Engelhardt BE. Jones A, et al. Among authors: engelhardt be. Nat Methods. 2023 Sep;20(9):1379-1387. doi: 10.1038/s41592-023-01972-2. Epub 2023 Aug 17. Nat Methods. 2023. PMID: 37592182 Free PMC article.
Nonnegative spatial factorization applied to spatial genomics.
Townes FW, Engelhardt BE. Townes FW, et al. Among authors: engelhardt be. Nat Methods. 2023 Feb;20(2):229-238. doi: 10.1038/s41592-022-01687-w. Epub 2022 Dec 31. Nat Methods. 2023. PMID: 36587187 Free PMC article.
63 results