Pan Y - Search Results

1

scMoMtF: An interpretable multitask learning framework for single-cell multi-omics data analysis.

Lan W, Ling T, Chen Q, Zheng R, Li M, Pan Y. Lan W, et al. Among authors: pan y. PLoS Comput Biol. 2024 Dec 18;20(12):e1012679. doi: 10.1371/journal.pcbi.1012679. eCollection 2024 Dec. PLoS Comput Biol. 2024. PMID: 39693287 Free PMC article.

2

A fast hierarchical clustering algorithm for functional modules discovery in protein interaction networks.

Wang J, Li M, Chen J, Pan Y. Wang J, et al. Among authors: pan y. IEEE/ACM Trans Comput Biol Bioinform. 2011 May-Jun;8(3):607-20. doi: 10.1109/TCBB.2010.75. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 20733244

3

A local average connectivity-based method for identifying essential proteins from the network level.

Li M, Wang J, Chen X, Wang H, Pan Y. Li M, et al. Among authors: pan y. Comput Biol Chem. 2011 Jun;35(3):143-50. doi: 10.1016/j.compbiolchem.2011.04.002. Epub 2011 Apr 30. Comput Biol Chem. 2011. PMID: 21704260

4

Identification of essential proteins based on edge clustering coefficient.

Wang J, Li M, Wang H, Pan Y. Wang J, et al. Among authors: pan y. IEEE/ACM Trans Comput Biol Bioinform. 2012 Jul-Aug;9(4):1070-80. doi: 10.1109/TCBB.2011.147. IEEE/ACM Trans Comput Biol Bioinform. 2012. PMID: 22084147

5

Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.

Li M, Wu X, Wang J, Pan Y. Li M, et al. Among authors: pan y. BMC Bioinformatics. 2012 May 23;13:109. doi: 10.1186/1471-2105-13-109. BMC Bioinformatics. 2012. PMID: 22621308 Free PMC article.

6

Construction and application of dynamic protein interaction network based on time course gene expression data.

Wang J, Peng X, Li M, Pan Y. Wang J, et al. Among authors: pan y. Proteomics. 2013 Jan;13(2):301-12. doi: 10.1002/pmic.201200277. Proteomics. 2013. PMID: 23225755

7

Identification of essential proteins from weighted protein-protein interaction networks.

Li M, Wang JX, Wang H, Pan Y. Li M, et al. Among authors: pan y. J Bioinform Comput Biol. 2013 Jun;11(3):1341002. doi: 10.1142/S0219720013410023. Epub 2013 Feb 25. J Bioinform Comput Biol. 2013. PMID: 23796179

8

LDAP: a web server for lncRNA-disease association prediction.

Lan W, Li M, Zhao K, Liu J, Wu FX, Pan Y, Wang J. Lan W, et al. Among authors: pan y. Bioinformatics. 2017 Feb 1;33(3):458-460. doi: 10.1093/bioinformatics/btw639. Bioinformatics. 2017. PMID: 28172495

9

SinNLRR: a robust subspace clustering method for cell type detection by non-negative and low-rank representation.

Zheng R, Li M, Liang Z, Wu FX, Pan Y, Wang J. Zheng R, et al. Among authors: pan y. Bioinformatics. 2019 Oct 1;35(19):3642-3650. doi: 10.1093/bioinformatics/btz139. Bioinformatics. 2019. PMID: 30821315

10

DeepEP: a deep learning framework for identifying essential proteins.

Zeng M, Li M, Wu FX, Li Y, Pan Y. Zeng M, et al. Among authors: pan y. BMC Bioinformatics. 2019 Dec 2;20(Suppl 16):506. doi: 10.1186/s12859-019-3076-y. BMC Bioinformatics. 2019. PMID: 31787076 Free PMC article.

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