Cai YD - Search Results

1

Prediction of Lung Adenocarcinoma Driver Genes Through Protein-Protein Interaction Networks Utilizing GenePlexus.

Yuan F, Zhang YH, Huang F, Cao X, Chen L, Li J, Shen W, Feng K, Bao Y, Huang T, Cai YD. Yuan F, et al. Among authors: cai yd. Proteomics. 2024 Dec 18:e202400296. doi: 10.1002/pmic.202400296. Online ahead of print. Proteomics. 2024. PMID: 39696915

2

Using compound similarity and functional domain composition for prediction of drug-target interaction networks.

Chen L, He ZS, Huang T, Cai YD. Chen L, et al. Among authors: cai yd. Med Chem. 2010 Nov;6(6):388-95. doi: 10.2174/157340610793563983. Med Chem. 2010. PMID: 21054276

3

Identification of lung-cancer-related genes with the shortest path approach in a protein-protein interaction network.

Li BQ, You J, Chen L, Zhang J, Zhang N, Li HP, Huang T, Kong XY, Cai YD. Li BQ, et al. Among authors: cai yd. Biomed Res Int. 2013;2013:267375. doi: 10.1155/2013/267375. Epub 2013 May 22. Biomed Res Int. 2013. PMID: 23762832 Free PMC article.

4

Identification of age-related macular degeneration related genes by applying shortest path algorithm in protein-protein interaction network.

Zhang J, Jiang M, Yuan F, Feng KY, Cai YD, Xu X, Chen L. Zhang J, et al. Among authors: cai yd. Biomed Res Int. 2013;2013:523415. doi: 10.1155/2013/523415. Epub 2013 Dec 18. Biomed Res Int. 2013. PMID: 24455700 Free PMC article.

5

Discovery of new candidate genes related to brain development using protein interaction information.

Chen L, Chu C, Kong X, Huang T, Cai YD. Chen L, et al. Among authors: cai yd. PLoS One. 2015 Jan 30;10(1):e0118003. doi: 10.1371/journal.pone.0118003. eCollection 2015. PLoS One. 2015. PMID: 25635857 Free PMC article.

6

Identifying Novel Candidate Genes Related to Apoptosis from a Protein-Protein Interaction Network.

Wang B, Yuan F, Kong X, Hu LD, Cai YD. Wang B, et al. Among authors: cai yd. Comput Math Methods Med. 2015;2015:715639. doi: 10.1155/2015/715639. Epub 2015 Oct 4. Comput Math Methods Med. 2015. PMID: 26543496 Free PMC article.

7

Identifying novel protein phenotype annotations by hybridizing protein-protein interactions and protein sequence similarities.

Chen L, Zhang YH, Huang T, Cai YD. Chen L, et al. Among authors: cai yd. Mol Genet Genomics. 2016 Apr;291(2):913-34. doi: 10.1007/s00438-015-1157-9. Epub 2016 Jan 4. Mol Genet Genomics. 2016. PMID: 26728152

8

Identification of novel candidate drivers connecting different dysfunctional levels for lung adenocarcinoma using protein-protein interactions and a shortest path approach.

Chen L, Huang T, Zhang YH, Jiang Y, Zheng M, Cai YD. Chen L, et al. Among authors: cai yd. Sci Rep. 2016 Jul 14;6:29849. doi: 10.1038/srep29849. Sci Rep. 2016. PMID: 27412431 Free PMC article.

9

A Shortest-Path-Based Method for the Analysis and Prediction of Fruit-Related Genes in Arabidopsis thaliana.

Zhu L, Zhang YH, Su F, Chen L, Huang T, Cai YD. Zhu L, et al. Among authors: cai yd. PLoS One. 2016 Jul 19;11(7):e0159519. doi: 10.1371/journal.pone.0159519. eCollection 2016. PLoS One. 2016. PMID: 27434024 Free PMC article.

10

Identification of Genes Associated with Breast Cancer Metastasis to Bone on a Protein-Protein Interaction Network with a Shortest Path Algorithm.

Cai YD, Zhang Q, Zhang YH, Chen L, Huang T. Cai YD, et al. J Proteome Res. 2017 Feb 3;16(2):1027-1038. doi: 10.1021/acs.jproteome.6b00950. Epub 2017 Jan 23. J Proteome Res. 2017. PMID: 28076954

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