Eisenberg M - Search Results

1

Solution structure of the exocyclic 1,N2-propanodeoxyguanosine adduct opposite deoxyadenosine in a DNA nonamer duplex at pH 8.9. model of pH-dependent conformational transition.

Huang P, Patel DJ, Eisenberg M. Huang P, et al. Among authors: eisenberg m. Biochemistry. 1993 Apr 20;32(15):3852-66. doi: 10.1021/bi00066a004. Biochemistry. 1993. PMID: 8385990

The solution structure of the complementary d(C1-A2-T3-G4-X5-G6-T7-A8-C9).d(G10-T11-A12-C13-A14-C15-A16-T17-G18) DNA duplex (designated X.A 9-mer), which contains a 1,N2-propanodeoxyguanosine exocyclic adduct X5 opposite deoxyadenosine A14 at the center, is pH dependent [Kouchakd …

The solution structure of the complementary d(C1-A2-T3-G4-X5-G6-T7-A8-C9).d(G10-T11-A12-C13-A14-C15-A16-T17-G18) DNA duplex (designated X.A …

2

The three-dimensional structure in solution (pH 5.8) of a DNA 9-mer duplex containing 1,N2-propanodeoxyguanosine opposite deoxyadenosine. Restrained molecular dynamics and NOE-based refinement calculations.

Huang P, Eisenberg M. Huang P, et al. Among authors: eisenberg m. Biochemistry. 1992 Jul 21;31(28):6518-32. doi: 10.1021/bi00143a023. Biochemistry. 1992. PMID: 1633163

3

NMR structural studies of the ionizing radiation adduct 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) opposite deoxyadenosine in a DNA duplex. 8-Oxo-7H-dG(syn).dA(anti) alignment at lesion site.

Kouchakdjian M, Bodepudi V, Shibutani S, Eisenberg M, Johnson F, Grollman AP, Patel DJ. Kouchakdjian M, et al. Among authors: eisenberg m. Biochemistry. 1991 Feb 5;30(5):1403-12. doi: 10.1021/bi00219a034. Biochemistry. 1991. PMID: 1991121

4

NMR studies of the exocyclic 1,N6-ethenodeoxyadenosine adduct (epsilon dA) opposite thymidine in a DNA duplex. Nonplanar alignment of epsilon dA(anti) and dT(anti) at the lesion site.

Kouchakdjian M, Eisenberg M, Yarema K, Basu A, Essigmann J, Patel DJ. Kouchakdjian M, et al. Among authors: eisenberg m. Biochemistry. 1991 Feb 19;30(7):1820-8. doi: 10.1021/bi00221a014. Biochemistry. 1991. PMID: 1993196

5

Structural features of an exocyclic adduct positioned opposite an abasic site in a DNA duplex.

Kouchakdjian M, Eisenberg M, Johnson F, Grollman AP, Patel DJ. Kouchakdjian M, et al. Among authors: eisenberg m. Biochemistry. 1991 Apr 2;30(13):3262-70. doi: 10.1021/bi00227a014. Biochemistry. 1991. PMID: 2009264

6

NMR studies of an exocyclic 1,N2-propanodeoxyguanosine adduct (X) located opposite deoxyadenosine (A) in DNA duplexes at basic pH: simultaneous partial intercalation of X and A between stacked bases.

Kouchakdjian M, Eisenberg M, Live D, Marinelli E, Grollman AP, Patel DJ. Kouchakdjian M, et al. Among authors: eisenberg m. Biochemistry. 1990 May 8;29(18):4456-65. doi: 10.1021/bi00470a028. Biochemistry. 1990. PMID: 2161685

7

Solution structure of an oligodeoxynucleotide duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyadenosine, determined by NMR spectroscopy and restrained molecular dynamics.

Korobka A, Cullinan D, Cosman M, Grollman AP, Patel DJ, Eisenberg M, de los Santos C. Korobka A, et al. Among authors: eisenberg m. Biochemistry. 1996 Oct 15;35(41):13310-8. doi: 10.1021/bi9605696. Biochemistry. 1996. PMID: 8873597

8

NMR solution structure of an oligodeoxynucleotide duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite thymidine: comparison with the duplex containing deoxyadenosine opposite the adduct.

Cullinan D, Korobka A, Grollman AP, Patel DJ, Eisenberg M, de los Santos C. Cullinan D, et al. Among authors: eisenberg m. Biochemistry. 1996 Oct 15;35(41):13319-27. doi: 10.1021/bi9605705. Biochemistry. 1996. PMID: 8873598

9

Solution structure of a DNA duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyguanosine.

Cullinan D, Johnson F, Grollman AP, Eisenberg M, de los Santos C. Cullinan D, et al. Among authors: eisenberg m. Biochemistry. 1997 Sep 30;36(39):11933-43. doi: 10.1021/bi9705725. Biochemistry. 1997. PMID: 9305987

10

Substrate specificity of Escherichia coli MutY protein.

Bulychev NV, Varaprasad CV, Dormán G, Miller JH, Eisenberg M, Grollman AP, Johnson F. Bulychev NV, et al. Among authors: eisenberg m. Biochemistry. 1996 Oct 8;35(40):13147-56. doi: 10.1021/bi960694h. Biochemistry. 1996. PMID: 8855952

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