Ferré-D'Amaré AR - Search Results

1

A specific monovalent metal ion integral to the AA platform of the RNA tetraloop receptor.

Basu S, Rambo RP, Strauss-Soukup J, Cate JH, Ferré-D'Amaré AR, Strobel SA, Doudna JA. Basu S, et al. Nat Struct Biol. 1998 Nov;5(11):986-92. doi: 10.1038/2960. Nat Struct Biol. 1998. PMID: 9808044

2

Use of cis- and trans-ribozymes to remove 5' and 3' heterogeneities from milligrams of in vitro transcribed RNA.

Ferré-D'Amaré AR, Doudna JA. Ferré-D'Amaré AR, et al. Nucleic Acids Res. 1996 Mar 1;24(5):977-8. doi: 10.1093/nar/24.5.977. Nucleic Acids Res. 1996. PMID: 8600468 Free PMC article. No abstract available.

3

Establishing suitability of RNA preparations for crystallization. Determination of polydispersity.

Ferré-d'Amaré AR, Doudna JA. Ferré-d'Amaré AR, et al. Methods Mol Biol. 1997;74:371-7. doi: 10.1385/0-89603-389-9:371. Methods Mol Biol. 1997. PMID: 9204452 No abstract available.

4

A general module for RNA crystallization.

Ferré-D'Amaré AR, Zhou K, Doudna JA. Ferré-D'Amaré AR, et al. J Mol Biol. 1998 Jun 12;279(3):621-31. doi: 10.1006/jmbi.1998.1789. J Mol Biol. 1998. PMID: 9641982 Free article.

5

Crystal structure of a hepatitis delta virus ribozyme.

Ferré-D'Amaré AR, Zhou K, Doudna JA. Ferré-D'Amaré AR, et al. Nature. 1998 Oct 8;395(6702):567-74. doi: 10.1038/26912. Nature. 1998. PMID: 9783582

6

A nested double pseudoknot is required for self-cleavage activity of both the genomic and antigenomic hepatitis delta virus ribozymes.

Wadkins TS, Perrotta AT, Ferré-D'Amaré AR, Doudna JA, Been MD. Wadkins TS, et al. RNA. 1999 Jun;5(6):720-7. doi: 10.1017/s1355838299990209. RNA. 1999. PMID: 10376872 Free PMC article.

7

RNA folds: insights from recent crystal structures.

Ferré-D'Amaré AR, Doudna JA. Ferré-D'Amaré AR, et al. Annu Rev Biophys Biomol Struct. 1999;28:57-73. doi: 10.1146/annurev.biophys.28.1.57. Annu Rev Biophys Biomol Struct. 1999. PMID: 10410795 Review.

8

Crystallization and structure determination of a hepatitis delta virus ribozyme: use of the RNA-binding protein U1A as a crystallization module.

Ferré-D'Amaré AR, Doudna JA. Ferré-D'Amaré AR, et al. J Mol Biol. 2000 Jan 21;295(3):541-56. doi: 10.1006/jmbi.1999.3398. J Mol Biol. 2000. PMID: 10623545 Free article.

9

Direct pK(a) measurement of the active-site cytosine in a genomic hepatitis delta virus ribozyme.

Lupták A, Ferré-D'Amaré AR, Zhou K, Zilm KW, Doudna JA. Lupták A, et al. J Am Chem Soc. 2001 Sep 5;123(35):8447-52. doi: 10.1021/ja016091x. J Am Chem Soc. 2001. PMID: 11525650

10

How RNA closes a Diel.

Pitt JN, Ferré-D'Amaré AR. Pitt JN, et al. Nat Struct Mol Biol. 2005 Mar;12(3):206-8. doi: 10.1038/nsmb0305-206. Nat Struct Mol Biol. 2005. PMID: 15744318 No abstract available.

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