K99 HG012203/HG/NHGRI NIH HHS/United States[Grants and Funding] - Search Results

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Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data.

Zhang MJ, Hou K, Dey KK, Sakaue S, Jagadeesh KA, Weinand K, Taychameekiatchai A, Rao P, Pisco AO, Zou J, Wang B, Gandal M, Raychaudhuri S, Pasaniuc B, Price AL. Zhang MJ, et al. Nat Genet. 2022 Oct;54(10):1572-1580. doi: 10.1038/s41588-022-01167-z. Epub 2022 Sep 1. Nat Genet. 2022. PMID: 36050550 Free PMC article.

Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics.

Jagadeesh KA, Dey KK, Montoro DT, Mohan R, Gazal S, Engreitz JM, Xavier RJ, Price AL, Regev A. Jagadeesh KA, et al. Nat Genet. 2022 Oct;54(10):1479-1492. doi: 10.1038/s41588-022-01187-9. Epub 2022 Sep 29. Nat Genet. 2022. PMID: 36175791 Free PMC article.

Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity.

Gazal S, Weissbrod O, Hormozdiari F, Dey KK, Nasser J, Jagadeesh KA, Weiner DJ, Shi H, Fulco CP, O'Connor LJ, Pasaniuc B, Engreitz JM, Price AL. Gazal S, et al. Nat Genet. 2022 Jun;54(6):827-836. doi: 10.1038/s41588-022-01087-y. Epub 2022 Jun 6. Nat Genet. 2022. PMID: 35668300 Free PMC article.

SAIGE-GENE+ improves the efficiency and accuracy of set-based rare variant association tests.

Zhou W, Bi W, Zhao Z, Dey KK, Jagadeesh KA, Karczewski KJ, Daly MJ, Neale BM, Lee S. Zhou W, et al. Nat Genet. 2022 Oct;54(10):1466-1469. doi: 10.1038/s41588-022-01178-w. Epub 2022 Sep 22. Nat Genet. 2022. PMID: 36138231 Free PMC article.

SNP-to-gene linking strategies reveal contributions of enhancer-related and candidate master-regulator genes to autoimmune disease.

Dey KK, Gazal S, van de Geijn B, Kim SS, Nasser J, Engreitz JM, Price AL. Dey KK, et al. Cell Genom. 2022 Jul 13;2(7):100145. doi: 10.1016/j.xgen.2022.100145. Cell Genom. 2022. PMID: 35873673 Free PMC article.

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