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Page 1
A Comparison of Microbial Genome Web Portals.
Karp PD, Ivanova N, Krummenacker M, Kyrpides N, Latendresse M, Midford P, Ong WK, Paley S, Seshadri R. Karp PD, et al. Front Microbiol. 2019 Feb 22;10:208. doi: 10.3389/fmicb.2019.00208. eCollection 2019. Front Microbiol. 2019. PMID: 30853946 Free PMC article. Review.
The BioCyc Metabolic Network Explorer.
Paley S, Karp PD. Paley S, et al. BMC Bioinformatics. 2021 Apr 21;22(1):208. doi: 10.1186/s12859-021-04132-5. BMC Bioinformatics. 2021. PMID: 33882841 Free PMC article.
Metabolic route computation in organism communities.
Krummenacker M, Latendresse M, Karp PD. Krummenacker M, et al. Microbiome. 2019 Jun 7;7(1):89. doi: 10.1186/s40168-019-0706-6. Microbiome. 2019. PMID: 31174602 Free PMC article.
The MetaCyc database of metabolic pathways and enzymes.
Caspi R, Billington R, Fulcher CA, Keseler IM, Kothari A, Krummenacker M, Latendresse M, Midford PE, Ong Q, Ong WK, Paley S, Subhraveti P, Karp PD. Caspi R, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D633-D639. doi: 10.1093/nar/gkx935. Nucleic Acids Res. 2018. PMID: 29059334 Free PMC article.
The BioCyc collection of microbial genomes and metabolic pathways.
Karp PD, Billington R, Caspi R, Fulcher CA, Latendresse M, Kothari A, Keseler IM, Krummenacker M, Midford PE, Ong Q, Ong WK, Paley SM, Subhraveti P. Karp PD, et al. Brief Bioinform. 2019 Jul 19;20(4):1085-1093. doi: 10.1093/bib/bbx085. Brief Bioinform. 2019. PMID: 29447345 Free PMC article.
29 results