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Robust collection and processing for label-free single voxel proteomics.
Kitata RB, Velickovic M, Xu Z, Zhao R, Scholten D, Chu RK, Orton DJ, Chrisler WB, Mathews JV, Piehowski PD, Liu T, Smith RD, Liu H, Wasserfall CH, Tsai CF, Shi T. Kitata RB, et al. bioRxiv [Preprint]. 2023 Aug 15:2023.08.14.553333. doi: 10.1101/2023.08.14.553333. bioRxiv. 2023. PMID: 37645907 Free PMC article. Preprint.
A streamlined tandem tip-based workflow for sensitive nanoscale phosphoproteomics.
Tsai CF, Wang YT, Hsu CC, Kitata RB, Chu RK, Velickovic M, Zhao R, Williams SM, Chrisler WB, Jorgensen ML, Moore RJ, Zhu Y, Rodland KD, Smith RD, Wasserfall CH, Shi T, Liu T. Tsai CF, et al. Commun Biol. 2023 Jan 18;6(1):70. doi: 10.1038/s42003-022-04400-x. Commun Biol. 2023. PMID: 36653408 Free PMC article.
Phosphorylation barcodes direct biased chemokine signaling at CXCR3.
Eiger DS, Smith JS, Shi T, Stepniewski TM, Tsai CF, Honeycutt C, Boldizsar N, Gardner J, Nicora CD, Moghieb AM, Kawakami K, Choi I, Hicks C, Zheng K, Warman A, Alagesan P, Knape NM, Huang O, Silverman JD, Smith RD, Inoue A, Selent J, Jacobs JM, Rajagopal S. Eiger DS, et al. Cell Chem Biol. 2023 Apr 20;30(4):362-382.e8. doi: 10.1016/j.chembiol.2023.03.006. Epub 2023 Apr 7. Cell Chem Biol. 2023. PMID: 37030291 Free PMC article.
Phosphorylation barcodes direct biased chemokine signaling at CXCR3.
Eiger DS, Smith JS, Shi T, Stepniewski TM, Tsai CF, Honeycutt C, Boldizsar N, Gardner J, Nicora CD, Moghieb AM, Kawakami K, Choi I, Zheng K, Warman A, Alagesan P, Knape NM, Huang O, Silverman JD, Smith RD, Inoue A, Selent J, Jacobs JM, Rajagopal S. Eiger DS, et al. bioRxiv [Preprint]. 2023 Mar 14:2023.03.14.532634. doi: 10.1101/2023.03.14.532634. bioRxiv. 2023. Update in: Cell Chem Biol. 2023 Apr 20;30(4):362-382.e8. doi: 10.1016/j.chembiol.2023.03.006. PMID: 36993369 Free PMC article. Updated. Preprint.
Machine learning-assisted elucidation of CD81-CD44 interactions in promoting cancer stemness and extracellular vesicle integrity.
Ramos EK, Tsai CF, Jia Y, Cao Y, Manu M, Taftaf R, Hoffmann AD, El-Shennawy L, Gritsenko MA, Adorno-Cruz V, Schuster EJ, Scholten D, Patel D, Liu X, Patel P, Wray B, Zhang Y, Zhang S, Moore RJ, Mathews JV, Schipma MJ, Liu T, Tokars VL, Cristofanilli M, Shi T, Shen Y, Dashzeveg NK, Liu H. Ramos EK, et al. Elife. 2022 Oct 4;11:e82669. doi: 10.7554/eLife.82669. Elife. 2022. PMID: 36193887 Free PMC article.